BLASTX nr result

ID: Atractylodes22_contig00046023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046023
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   133   1e-29
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   132   3e-29
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  152 bits (385), Expect = 2e-35
 Identities = 70/101 (69%), Positives = 84/101 (83%)
 Frame = -1

Query: 304 ALRLFSEMEVAGVQPDEVTFIAVFTACSYSGMEHEGLRFFNRMCEEYNIKPKTEHYVCLI 125
           ALRLFSEME AGV+PD++TFIA+FTACSYSGM HE +R  N MC  YN++PK+EHY C++
Sbjct: 322 ALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIV 381

Query: 124 DLLGRAGLFNEAKGMIQRLPNSCSPKEAAVAWRALLSACQS 2
           DLLGRAGL  EAK +I ++PNS SP E A+AWRALLSAC S
Sbjct: 382 DLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCS 422


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/99 (62%), Positives = 77/99 (77%)
 Frame = -1

Query: 304 ALRLFSEMEVAGVQPDEVTFIAVFTACSYSGMEHEGLRFFNRMCEEYNIKPKTEHYVCLI 125
           AL+LF +ME  GV+PD++TFIAVFTACSYSGM +EGL   ++MC  YNI PK+EHY CL+
Sbjct: 325 ALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLV 384

Query: 124 DLLGRAGLFNEAKGMIQRLPNSCSPKEAAVAWRALLSAC 8
           DLL RAGLF EA  MI+++ NS +  E  +AWRA LSAC
Sbjct: 385 DLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSAC 423


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/99 (62%), Positives = 77/99 (77%)
 Frame = -1

Query: 304 ALRLFSEMEVAGVQPDEVTFIAVFTACSYSGMEHEGLRFFNRMCEEYNIKPKTEHYVCLI 125
           A++LF EME AG++PD +TFIAV+ ACS SGM  EG+R +NRM   + I+PK+EHY C+I
Sbjct: 322 AIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVI 381

Query: 124 DLLGRAGLFNEAKGMIQRLPNSCSPKEAAVAWRALLSAC 8
           DLL R G F EA+G+IQRLP + SP E AVAWRA LSAC
Sbjct: 382 DLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/99 (62%), Positives = 76/99 (76%)
 Frame = -1

Query: 304 ALRLFSEMEVAGVQPDEVTFIAVFTACSYSGMEHEGLRFFNRMCEEYNIKPKTEHYVCLI 125
           A++LF EME AG++PD +TFIAV  ACS SGM  EG+R +NRM   + I+PK+EHY C+I
Sbjct: 322 AIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVI 381

Query: 124 DLLGRAGLFNEAKGMIQRLPNSCSPKEAAVAWRALLSAC 8
           DLL R G F EA+G+IQRLP + SP E AVAWRA LSAC
Sbjct: 382 DLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/100 (61%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
 Frame = -1

Query: 304 ALRLFSEMEVAGVQPDEVTFIAVFTACSYSGMEHEGLRFFNRMCEEYNIKPKTEHYVCLI 125
           AL++FSEME  G++PD++TFIAVFTACSYSGM HEGL+  ++M   Y I+PK+EHY CL+
Sbjct: 322 ALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLV 381

Query: 124 DLLGRAGLFNEAKGMIQRLPN-SCSPKEAAVAWRALLSAC 8
           DLL RAGLF EA  MI+R+ + S +  E  +AWRA LSAC
Sbjct: 382 DLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSAC 421


Top