BLASTX nr result

ID: Atractylodes22_contig00046021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00046021
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329212.1| GRAS family transcription factor [Populus tr...   127   9e-28
ref|XP_002316032.1| GRAS family transcription factor [Populus tr...   125   5e-27
ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...   124   8e-27
ref|XP_002316034.1| GRAS family transcription factor [Populus tr...   124   1e-26
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...   123   1e-26

>ref|XP_002329212.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222870993|gb|EEF08124.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 594

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/126 (50%), Positives = 86/126 (68%)
 Frame = -1

Query: 382 LKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXXXXXAVYSSYGLWTMIAQQDRLESLM 203
           LK FA+++N+ FSF +VMV D+LD K            AVYSSY    +IA  +RL+S+M
Sbjct: 386 LKSFAQNMNIPFSFKIVMVSDLLDLKENLLEIDVEEKIAVYSSYLPRKLIAMPNRLDSMM 445

Query: 202 KVIKNANPRVMVVSEAATNLNSPNFVNRFIEALFFYGALFDSLEDCMSREDQNRSITECM 23
           K+I+N NP +MVV+E   N N+P+FV+RF++ LF+Y A FD L+ CM R+D NR ITE +
Sbjct: 446 KMIRNINPCIMVVTEVEANHNAPSFVHRFVDLLFYYSAYFDCLDACMERDDPNRMITESL 505

Query: 22  YMGYGI 5
           Y G GI
Sbjct: 506 YFGEGI 511


>ref|XP_002316032.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865072|gb|EEF02203.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 549

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/127 (51%), Positives = 85/127 (66%)
 Frame = -1

Query: 385 RLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXXXXXAVYSSYGLWTMIAQQDRLESL 206
           RL  FA+++NL  SFNVVMV D+LD +            AV+S + L ++IA  +RL+SL
Sbjct: 340 RLLSFAQTMNLPCSFNVVMVSDILDLREDHFQLDDEETVAVFSEFYLASLIASPNRLDSL 399

Query: 205 MKVIKNANPRVMVVSEAATNLNSPNFVNRFIEALFFYGALFDSLEDCMSREDQNRSITEC 26
           MKVI+N NPRVMV+ E   N NSP FV+RF+E LF+  A FD L+ CM R+D NR I+E 
Sbjct: 400 MKVIRNINPRVMVIIEVEANHNSPVFVDRFVETLFYLSAFFDCLDTCMERDDPNRVISES 459

Query: 25  MYMGYGI 5
           +Y G GI
Sbjct: 460 IYFGEGI 466


>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score =  124 bits (311), Expect = 8e-27
 Identities = 64/127 (50%), Positives = 80/127 (62%)
 Frame = -1

Query: 385 RLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXXXXXAVYSSYGLWTMIAQQDRLESL 206
           RL  FAES+N+ FSF  VMV DMLD K            AVYS Y L  ++   +RLES+
Sbjct: 353 RLASFAESMNVPFSFRAVMVSDMLDLKKELFELDSEEAVAVYSEYFLMNLLVAPNRLESI 412

Query: 205 MKVIKNANPRVMVVSEAATNLNSPNFVNRFIEALFFYGALFDSLEDCMSREDQNRSITEC 26
           M +++N NP VMVV E   N NSP+FV+RFIEALFFY A FD  + CM R+D NR   E 
Sbjct: 413 MGMLRNINPNVMVVMEVEANNNSPSFVHRFIEALFFYSAYFDCFDACMERDDPNRMAAES 472

Query: 25  MYMGYGI 5
           ++  +GI
Sbjct: 473 VFFHHGI 479


>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865074|gb|EEF02205.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 588

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/123 (52%), Positives = 80/123 (65%)
 Frame = -1

Query: 385 RLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXXXXXAVYSSYGLWTMIAQQDRLESL 206
           RL  FAE++N+ FSF VVMV DMLD K            AVY+   L ++IA  +RL+S+
Sbjct: 372 RLMSFAETMNIPFSFKVVMVSDMLDLKKDLFELGAEEAVAVYAENSLRSLIALPNRLDSI 431

Query: 205 MKVIKNANPRVMVVSEAATNLNSPNFVNRFIEALFFYGALFDSLEDCMSREDQNRSITEC 26
           MKV +N NPR++VV E   N NSP+FVNRFIEALFFY A FD  + CM R+  NR I E 
Sbjct: 432 MKVFRNINPRIVVVMEVEANNNSPSFVNRFIEALFFYSAYFDCFDACMGRDSPNRMIAES 491

Query: 25  MYM 17
            Y+
Sbjct: 492 KYI 494


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/127 (48%), Positives = 84/127 (66%)
 Frame = -1

Query: 385 RLKFFAESINLSFSFNVVMVGDMLDFKXXXXXXXXXXXXAVYSSYGLWTMIAQQDRLESL 206
           RL  FAE++N++FSF + +V D+LD K            A+Y +Y    +I+  +RL+S+
Sbjct: 375 RLISFAETMNIAFSFKMALVSDLLDLKEDLLDLDDGETVAIYFAYLPRNLISLPNRLDSM 434

Query: 205 MKVIKNANPRVMVVSEAATNLNSPNFVNRFIEALFFYGALFDSLEDCMSREDQNRSITEC 26
           M++IKN NP V+VV+E   N NSP FVNRF+EALF+Y A FD L+ CM R D+NR I E 
Sbjct: 435 MRMIKNVNPCVIVVAEVEANHNSPTFVNRFVEALFYYSAYFDCLDACMERNDKNRMIMES 494

Query: 25  MYMGYGI 5
           MY G GI
Sbjct: 495 MYFGIGI 501


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