BLASTX nr result

ID: Atractylodes22_contig00045937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045937
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27489.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    66   3e-09
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...    63   2e-08
emb|CBI27491.3| unnamed protein product [Vitis vinifera]               63   2e-08

>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
 Frame = -3

Query: 222  EEGKPIVLRQLFVTVSQKLCYAVKQHVSHITSIACNRNSSIQINLDDGDITSE---FKDM 52
            EE +  VLRQLFVTVS KLCYAVKQHVSH+ S A  +N S + + ++ D   +   F D+
Sbjct: 1079 EETQVAVLRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEESSNNKDYVDDAELFDDI 1138

Query: 51   PDTFVDLPRKN 19
             D+ VD+P K+
Sbjct: 1139 QDSLVDIPPKS 1149


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
 Frame = -3

Query: 231  DGPEEGKPIVLRQLFVTVSQKLCYAVKQHVSHITSIACNRNSSIQ---INLDDGDITSEF 61
            DG  + K  VLRQLFVTVS KLCYA+K HV  + S A     S +   ++++D D  ++F
Sbjct: 993  DGVGDAKETVLRQLFVTVSPKLCYAIKHHVIQLKSFASGGKYSAEGSSVDMEDIDDAAQF 1052

Query: 60   KDMPDTFVDLPRKN 19
            K++P++F+D+P K+
Sbjct: 1053 KEIPNSFLDIPPKS 1066


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
 Frame = -3

Query: 219  EGKPIVLRQLFVTVSQKLCYAVKQHVSHITSIACNRNSSIQINLDDGDITSE---FKDMP 49
            E +  VLRQLFVTVS KLCYAVKQHVSH+ S A  +N S + + ++ D   +   F D+ 
Sbjct: 1142 ETQVAVLRQLFVTVSPKLCYAVKQHVSHLKSFAHGKNFSAEESSNNKDYVDDAELFDDIQ 1201

Query: 48   DTFVDLPRKN 19
            D+ VD+P K+
Sbjct: 1202 DSLVDIPPKS 1211


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
 Frame = -3

Query: 204  VLRQLFVTVSQKLCYAVKQHVSHITSIACNRNSSIQINLDDGDITSE---FKDMPDTFVD 34
            VLRQLFVTVS KLC+AVKQHVSH+ S A  +  S + N ++ D   +   F D+ D+ VD
Sbjct: 1169 VLRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNIDYVDDAELFNDIQDSLVD 1228

Query: 33   LPRKN 19
            +P K+
Sbjct: 1229 IPPKS 1233


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
 Frame = -3

Query: 204  VLRQLFVTVSQKLCYAVKQHVSHITSIACNRNSSIQINLDDGDITSE---FKDMPDTFVD 34
            VLRQLFVTVS KLC+AVKQHVSH+ S A  +  S + N ++ D   +   F D+ D+ VD
Sbjct: 4552 VLRQLFVTVSPKLCHAVKQHVSHLKSFAHGKKFSAESNSNNIDYVDDAELFNDIQDSLVD 4611

Query: 33   LPRKN 19
            +P K+
Sbjct: 4612 IPPKS 4616


Top