BLASTX nr result

ID: Atractylodes22_contig00045882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045882
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   120   2e-25
ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloro...   117   8e-25
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   117   8e-25
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   113   1e-23

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/124 (50%), Positives = 79/124 (63%), Gaps = 11/124 (8%)
 Frame = +1

Query: 145 KTMKEYIDMELQNKRR----------NFWEAASVFSXXXXXXXXXXXXXXXXXGCNGGTD 294
           KTMK++ID++ QNK+           +FW AASVFS                 G    T 
Sbjct: 237 KTMKDHIDLDSQNKKPPGRDLKEIAGSFWSAASVFSKKLQKWRRKQKMKKRDNGGGSATL 296

Query: 295 TSRSKLG-QFRDTQSEVADYGFGRRSCDTEPRFSVDAHRMSVEDPRFSFDEHRASWDGYM 471
                +G Q+R+TQSE+ADYGFGRRSCDT+PRFS+DA R+S +DPR+SFDE RASWDGY+
Sbjct: 297 PVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASWDGYL 356

Query: 472 MART 483
           + RT
Sbjct: 357 IGRT 360


>ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449533170|ref|XP_004173550.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 631

 Score =  117 bits (294), Expect = 8e-25
 Identities = 61/118 (51%), Positives = 77/118 (65%), Gaps = 5/118 (4%)
 Frame = +1

Query: 145 KTMKEYIDMELQNK----RRNFWEAASVFSXXXXXXXXXXXXXXXXXGCNGGTDTSRSKL 312
           KTMK++ID++   K    R +FW AASVFS                 G    T      +
Sbjct: 213 KTMKDHIDLDSHTKKPSGRGSFWSAASVFSKKLQKWRDKQKEKKQRNGGGSTTLPVEKPI 272

Query: 313 GQ-FRDTQSEVADYGFGRRSCDTEPRFSVDAHRMSVEDPRFSFDEHRASWDGYMMART 483
           G+ FR+TQSE+ADYGFGRRSCD +PRFS+DA RMS +DPR+SFDE RASWDGY+++RT
Sbjct: 273 GRHFRETQSEIADYGFGRRSCDIDPRFSLDAGRMSFDDPRYSFDEPRASWDGYLISRT 330


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  117 bits (294), Expect = 8e-25
 Identities = 63/126 (50%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
 Frame = +1

Query: 142 LKTMKEYIDMELQNKRRN----------FWEAASVFSXXXXXXXXXXXXXXXXXGCNGGT 291
           LKTMK++ID++ Q+K+ +          FW AASVFS                 G  G  
Sbjct: 265 LKTMKDHIDLDSQSKKTSGRDLKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNGGPGSA 324

Query: 292 DTSRSK-LG-QFRDTQSEVADYGFGRRSCDTEPRFSVDAHRMSVEDPRFSFDEHRASWDG 465
                K +G Q+R+TQSE+ADYGFGRRSCDT+PRFS+DA R+S +DPR+SFDE RASWDG
Sbjct: 325 TLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASWDG 384

Query: 466 YMMART 483
           Y++ RT
Sbjct: 385 YLIGRT 390


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  115 bits (288), Expect = 4e-24
 Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
 Frame = +1

Query: 142 LKTMKEYIDMELQNKRRN----------FWEAASVFSXXXXXXXXXXXXXXXXX-GCNGG 288
           LKTMK++ID++ Q+K+ +          FW AASVFS                  G    
Sbjct: 211 LKTMKDHIDLDSQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWRQKQKLKKQRNDGPGSA 270

Query: 289 TDTSRSKLG-QFRDTQSEVADYGFGRRSCDTEPRFSVDAHRMSVEDPRFSFDEHRASWDG 465
           T      +G Q+R+TQSE+ADYGFGRRSCDT+PRFS+DA R+S +DPR+SFDE RASWDG
Sbjct: 271 TLPVEKPIGRQYRETQSEIADYGFGRRSCDTDPRFSLDAGRISFDDPRYSFDEPRASWDG 330

Query: 466 YMMART 483
           Y++ RT
Sbjct: 331 YLIGRT 336


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 11/124 (8%)
 Frame = +1

Query: 145 KTMKEYIDMELQNKRRN----------FWEAASVFSXXXXXXXXXXXXXXXXXGCNGGTD 294
           K++K+++D++ Q K+ +          FW AASVFS                 G    T 
Sbjct: 252 KSIKDHMDLDSQPKKPSGRDFKEIAGSFWSAASVFSKKWQKWRDKQKLKKRRNGDISATL 311

Query: 295 TSRSKLG-QFRDTQSEVADYGFGRRSCDTEPRFSVDAHRMSVEDPRFSFDEHRASWDGYM 471
                +G QFR+TQSE+ADYG+GRRSCDT+PRFS+DA RMS +DPR+SFDE RASWDGY+
Sbjct: 312 PVEKPIGRQFRETQSEIADYGYGRRSCDTDPRFSLDAGRMSFDDPRYSFDEPRASWDGYL 371

Query: 472 MART 483
           ++RT
Sbjct: 372 VSRT 375


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