BLASTX nr result

ID: Atractylodes22_contig00045871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045871
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   103   1e-20
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
emb|CBI18928.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    98   8e-19
emb|CAN63658.1| hypothetical protein VITISV_008414 [Vitis vinifera]    98   8e-19

>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = -2

Query: 224 MMLSVFLALFLPCAGMSAVFLVYICLLCYAARHYQPTN--APTKPATENGLWSAQLQKLP 51
           M+LSVFLALFLPC GMSA+FL+YICLL YAA H+  +    P KP+ E GL ++ L+KLP
Sbjct: 45  MLLSVFLALFLPCVGMSAIFLIYICLLWYAANHHHHSEIVTPVKPSAEKGLSASDLEKLP 104

Query: 50  ITTGKDLVLGTECAVC 3
             TGK+L+LGTECAVC
Sbjct: 105 KMTGKELILGTECAVC 120


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/74 (67%), Positives = 58/74 (78%)
 Frame = -2

Query: 224 MMLSVFLALFLPCAGMSAVFLVYICLLCYAARHYQPTNAPTKPATENGLWSAQLQKLPIT 45
           M++SVFLALFLPCAGMSAVF+VYICLL Y A +      P K  TE GL S++L+KLP  
Sbjct: 1   MLVSVFLALFLPCAGMSAVFIVYICLLWYTANNQPEIRLPVKTVTEKGLSSSELEKLPKV 60

Query: 44  TGKDLVLGTECAVC 3
           TGK+LVLGTECAVC
Sbjct: 61  TGKELVLGTECAVC 74


>emb|CBI18928.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/76 (65%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 TMMLSVFLALFLPCAGMSAVFLVYICLLCYAARHYQP-TNAPTKPATENGLWSAQLQKLP 51
           TM+LS+FLALFLPCAGMS VF+VYICLL Y+A   QP   AP KP +E GL ++ L KLP
Sbjct: 33  TMLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQQPELPAPVKPESEKGLSASDLDKLP 92

Query: 50  ITTGKDLVLGTECAVC 3
              GKDLV+G ECAVC
Sbjct: 93  KLAGKDLVVGAECAVC 108


>ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23 [Vitis vinifera]
          Length = 129

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 MMLSVFLALFLPCAGMSAVFLVYICLLCYAARHYQP-TNAPTKPATENGLWSAQLQKLPI 48
           M+LS+FLALFLPCAGMS VF+VYICLL Y+A   QP   AP KP +E GL ++ L KLP 
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQQPELPAPVKPESEKGLSASDLDKLPK 60

Query: 47  TTGKDLVLGTECAVC 3
             GKDLV+G ECAVC
Sbjct: 61  LAGKDLVVGAECAVC 75


>emb|CAN63658.1| hypothetical protein VITISV_008414 [Vitis vinifera]
          Length = 169

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
 Frame = -2

Query: 224 MMLSVFLALFLPCAGMSAVFLVYICLLCYAARHYQP-TNAPTKPATENGLWSAQLQKLPI 48
           M+LS+FLALFLPCAGMS VF+VYICLL Y+A   QP   AP KP +E GL ++ L KLP 
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQQPELPAPVKPESEKGLSASDLDKLPK 60

Query: 47  TTGKDLVLGTECAVC 3
             GKDLV+G ECAVC
Sbjct: 61  LAGKDLVVGAECAVC 75


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