BLASTX nr result

ID: Atractylodes22_contig00045693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045693
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein A...    99   3e-19
ref|XP_002509961.1| ring finger protein, putative [Ricinus commu...    97   2e-18
ref|NP_200123.2| RING/U-box domain-containing protein-like prote...    95   7e-18
ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
           max]
          Length = 582

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 40/46 (86%), Positives = 46/46 (100%)
 Frame = -2

Query: 384 AICLSDYKPKESLRTIPECNHYFHADCIDEWLKLNATCPVCRNSPE 247
           AICLS+Y+PKE+LR+IPECNHYFHADCIDEWL+LNATCP+CRNSPE
Sbjct: 337 AICLSEYQPKETLRSIPECNHYFHADCIDEWLRLNATCPLCRNSPE 382


>ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
           gi|223549860|gb|EEF51348.1| ring finger protein,
           putative [Ricinus communis]
          Length = 392

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -2

Query: 381 ICLSDYKPKESLRTIPECNHYFHADCIDEWLKLNATCPVCRNSPE 247
           ICL +Y+PKE+LRTIPECNHYFHADCIDEWLK+NATCP+CRNSP+
Sbjct: 313 ICLCEYQPKETLRTIPECNHYFHADCIDEWLKMNATCPLCRNSPD 357


>ref|NP_200123.2| RING/U-box domain-containing protein-like protein [Arabidopsis
           thaliana] gi|332008921|gb|AED96304.1| RING/U-box
           domain-containing protein-like protein [Arabidopsis
           thaliana]
          Length = 382

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -2

Query: 384 AICLSDYKPKESLRTIPECNHYFHADCIDEWLKLNATCPVCRNSPE 247
           AICLS+Y+PKE+LRTIP+C H FHADCIDEWLKLN TCPVCRNSPE
Sbjct: 331 AICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNSPE 376


>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 35/45 (77%), Positives = 44/45 (97%)
 Frame = -2

Query: 381 ICLSDYKPKESLRTIPECNHYFHADCIDEWLKLNATCPVCRNSPE 247
           ICLS+Y+PK++LRTIP CNHYFHA+C+DEWLK+NATCP+CRNSP+
Sbjct: 313 ICLSEYQPKDTLRTIPNCNHYFHANCVDEWLKMNATCPLCRNSPD 357


>ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|222841989|gb|EEE79536.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 35/45 (77%), Positives = 45/45 (100%)
 Frame = -2

Query: 381 ICLSDYKPKESLRTIPECNHYFHADCIDEWLKLNATCPVCRNSPE 247
           ICLS+Y+PK++LRTIP+C+HYFHA+CIDEWLK+NATCP+CRNSP+
Sbjct: 318 ICLSEYQPKDTLRTIPDCSHYFHANCIDEWLKMNATCPLCRNSPD 362


Top