BLASTX nr result

ID: Atractylodes22_contig00045684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045684
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               99   3e-19
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = +3

Query: 168 MNPLKQIHAHTLRNGIDFTKFLITKLLEIPNIPYAHKVFDLIPQPTIFLYNKLIQAFSSH 347
           MN LKQI A+TLRNGI+ TK LI  LL+IP+IPYAHK+FD IP+PT+FLYNKLIQA+SSH
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 348 G 350
           G
Sbjct: 61  G 61


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = +3

Query: 168 MNPLKQIHAHTLRNGIDFTKFLITKLLEIPNIPYAHKVFDLIPQPTIFLYNKLIQAFSSH 347
           MN LKQI A+TLRNGI+ TK LI  LL+IP+IPYAHK+FD IP+PT+FLYNKLIQA+SSH
Sbjct: 1   MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSH 60

Query: 348 G 350
           G
Sbjct: 61  G 61


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/58 (70%), Positives = 50/58 (86%)
 Frame = +3

Query: 168 MNPLKQIHAHTLRNGIDFTKFLITKLLEIPNIPYAHKVFDLIPQPTIFLYNKLIQAFS 341
           MN LKQIHA+TLRNGID+ K L  +L++IPN+PYAHK+ DLIP P +FLYNKLIQA+S
Sbjct: 1   MNQLKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYS 58


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/60 (71%), Positives = 49/60 (81%)
 Frame = +3

Query: 168 MNPLKQIHAHTLRNGIDFTKFLITKLLEIPNIPYAHKVFDLIPQPTIFLYNKLIQAFSSH 347
           M  +KQIH +TLRNGID TK LI KLLEIPN+ YAHKV    P+PT+FLYNKLIQA+SSH
Sbjct: 1   MRQVKQIHGYTLRNGIDQTKILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSH 60


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/61 (65%), Positives = 52/61 (85%)
 Frame = +3

Query: 168 MNPLKQIHAHTLRNGIDFTKFLITKLLEIPNIPYAHKVFDLIPQPTIFLYNKLIQAFSSH 347
           MN LKQIHA++LRNG+D TKFLI KLL++P++PYA  +FD IP+P+++LYNK IQ FSS 
Sbjct: 1   MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSI 60

Query: 348 G 350
           G
Sbjct: 61  G 61


Top