BLASTX nr result

ID: Atractylodes22_contig00045677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045677
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08243.1| RNA-directed DNA polymerase , putative [Medicago ...    79   5e-13
emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   8e-13
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptas...    77   1e-12
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   2e-12

>gb|ABN08243.1| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 125

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/74 (50%), Positives = 49/74 (66%)
 Frame = -3

Query: 260 ILGQMRIGDRWRRWMKACLNSATVSVLMNGSPSAEFSLQRWVR*GDPLSSFLFLIVVESL 81
           ++G M     WR+WMK C+ + T SVL+NGSP+ EF LQR +R  DPLS FLFL+ VE L
Sbjct: 28  VMGMMSFPSSWRKWMKECIGTTTTSVLINGSPTDEFQLQRGLRQVDPLSPFLFLLAVEGL 87

Query: 80  NVVMEESLERAREV 39
           +V+M   +E    V
Sbjct: 88  HVLMTYVVESGYSV 101


>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/66 (51%), Positives = 51/66 (77%)
 Frame = -3

Query: 257 LGQMRIGDRWRRWMKACLNSATVSVLMNGSPSAEFSLQRWVR*GDPLSSFLFLIVVESLN 78
           L QM    RW++W+ +C++SA  SVL+NGSPS  F LQR +R GDPLS FLF++VVE +N
Sbjct: 590 LSQMGFPPRWKKWISSCVSSAAASVLLNGSPSLPFKLQRGLRQGDPLSPFLFVLVVEVMN 649

Query: 77  VVMEES 60
           ++++++
Sbjct: 650 LMIKKA 655


>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/68 (52%), Positives = 49/68 (72%)
 Frame = -3

Query: 260 ILGQMRIGDRWRRWMKACLNSATVSVLMNGSPSAEFSLQRWVR*GDPLSSFLFLIVVESL 81
           +L QM   D WR WMK+C+ SA+ S+L+NGSP+    LQR +R GDPLS FLF + VE L
Sbjct: 589 VLEQMGFPDLWRAWMKSCVMSASASILINGSPTQPIKLQRGLRQGDPLSPFLFNLAVEPL 648

Query: 80  NVVMEESL 57
           N++M++ L
Sbjct: 649 NLLMKKGL 656


>gb|ABN08718.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 320

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
 Frame = -3

Query: 332 SCKCL-------V*IEMQYNREGYGVTSETGILGQMRIGDRWRRWMKACLNSATVSVLMN 174
           +CKC        V  E  Y    +G      I G+M     WR+W+K C+ + T S+L+N
Sbjct: 93  ACKCRKDLMLFKVDFEKAYESVDWGYLD--AITGRMGFPTLWRKWIKECVCTTTTSMLVN 150

Query: 173 GSPSAEFSLQRWVR*GDPLSSFLFLIVVESLNVVMEESLE 54
           G+P+ EF L+R +R GDPLS FLFL+  E LN++M+  +E
Sbjct: 151 GNPTLEFPLERGLRQGDPLSPFLFLLAAEGLNIMMQSMVE 190


>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/64 (51%), Positives = 49/64 (76%)
 Frame = -3

Query: 260 ILGQMRIGDRWRRWMKACLNSATVSVLMNGSPSAEFSLQRWVR*GDPLSSFLFLIVVESL 81
           +L +M   D+W +W+  C+++A VS+L+NGSP A F LQR +R GDPLSSFLF+++ ESL
Sbjct: 589 VLKEMNFPDQWCKWIMNCVSTAAVSILVNGSPCAPFKLQRGLRQGDPLSSFLFVLIAESL 648

Query: 80  NVVM 69
           N ++
Sbjct: 649 NQII 652


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