BLASTX nr result

ID: Atractylodes22_contig00045557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045557
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    67   2e-09
emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]    66   3e-09
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    57   2e-06
emb|CBI17307.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Vitis
            vinifera]
          Length = 950

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 31/181 (17%)
 Frame = +1

Query: 1    DKCLTYFTTSELLTKTEHAWHCEQCSKALLEQRM-----------RLKNNGAIHRIPSIP 147
            D CLTYFT  ELL+  EHAWHCE CSK L +QR+           +++ NG+  +I + P
Sbjct: 616  DSCLTYFTKPELLSN-EHAWHCENCSKILWDQRIKTRTNLPNTISKIQMNGSEGKIQNGP 674

Query: 148  -------SHSGIEHSYSNGVRNPIDVRGVLGN-------SDEKSGLHNDKSDCSR----- 270
                   S   ++   +  V+N  D   +LG        SD+ S  +  K   S+     
Sbjct: 675  FGLCKDISPDEVKDIDNENVKN--DGHNILGGLAPHDRISDDDSKQNGLKLQTSQTVEVN 732

Query: 271  -VASELEERGSVVNGVSPELSQHPTSVTASSEESCTIQDTDSCEVNKPGDKFKNERVQKR 447
             V S+ E   S +N   PELS    +    S+ S +   +DSC V++P     N   Q+ 
Sbjct: 733  PVVSQCEGGKSKMNYALPELSHSSDTYKTCSQASLSDPASDSCSVHEPNSVGCNTGKQRN 792

Query: 448  A 450
            +
Sbjct: 793  S 793


>emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]
          Length = 1036

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 31/181 (17%)
 Frame = +1

Query: 1    DKCLTYFTTSELLTKTEHAWHCEQCSKALLEQRM-----------RLKNNGAIHRIPSIP 147
            D CLTYFT  ELL+  EHAWHCE CSK L +QR+           +++ NG+  +I + P
Sbjct: 702  DSCLTYFTKPELLSN-EHAWHCENCSKILRDQRIKTRTNLPNTISKIQMNGSEDKIQNGP 760

Query: 148  -------SHSGIEHSYSNGVRNPIDVRGVLGN-------SDEKSGLHNDKSDCSR----- 270
                   S   ++   +  V+N  D   +LG        SD+ S  +  K   S+     
Sbjct: 761  FGLCKDISPDEVKDIDNENVKN--DGHNILGGLAPHDRISDDDSKQNGLKLQTSQTVEVN 818

Query: 271  -VASELEERGSVVNGVSPELSQHPTSVTASSEESCTIQDTDSCEVNKPGDKFKNERVQKR 447
             V S+ E   S +N   P+LS    +    S+ S +   +DSC V++P     N   Q+ 
Sbjct: 819  PVVSQCEGGKSKMNYALPDLSHSSDTYKTCSQASLSDPASDSCSVHEPNSVGCNTGKQRN 878

Query: 448  A 450
            +
Sbjct: 879  S 879


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 980

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
 Frame = +1

Query: 1    DKCLTYFTTSELLTKTEHAWHCEQCSKALLEQRMRLK---------NNGAIHRIP--SIP 147
            + CL +F   ELL+  E+AWHCE CSK L  Q+M  K         N   IH  P  ++ 
Sbjct: 675  ESCLAHFIKPELLSD-ENAWHCENCSKVLQHQKMEEKKQARAVSDRNETGIHDEPWHAVN 733

Query: 148  SHSGIEHSYSNG-VRNPIDVRGVLGNSDEKSGLHNDKSD-CSRVASELEERGSVVNGVSP 321
            S S    +  NG ++N  +V+ ++     K+ L N + D  S + +E +     +     
Sbjct: 734  SCSVKVRTIGNGDIKNDQNVQNLVACDKHKTNLENGQRDELSLIVNEKDSGSFEMEDTHN 793

Query: 322  ELSQHPTSVTASSEESCTIQDTDSCEVNKPGDKFKNERVQKRAS 453
            +  Q  +     +EESC+    DSC           E VQ+R S
Sbjct: 794  DELQSSSFHNTCNEESCSHLAVDSC---------VTENVQRRDS 828


>emb|CBI17307.3| unnamed protein product [Vitis vinifera]
          Length = 473

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
 Frame = +1

Query: 1   DKCLTYFTTSELLTKTEHAWHCEQCSKALLEQRMRLKNNGAIHRIPSIPSHSGIEHSYSN 180
           D CLTYFT  ELL+  EHAWHCE CSK L +QR++ + N     +P+  S          
Sbjct: 224 DSCLTYFTKPELLSN-EHAWHCENCSKILWDQRIKTRTN-----LPNTIS---------- 267

Query: 181 GVRNPIDVRGVLGNSDE--KSGLHNDKSDCSRVASELEERGSV-VNGVSPELSQHPTSVT 351
                I + G L +S +  K+      SD +  +  + E  SV  N      SQ  T   
Sbjct: 268 ----KIQMNGKLSHSSDTYKTCSQASLSDPASDSCSVHEPNSVGCNTGKQRNSQMLTGEL 323

Query: 352 ASSEESCTIQDTDSCEVNKPGDK 420
            S E+     D++S +V +   K
Sbjct: 324 ESEEDEDKEMDSESVKVKRDATK 346


Top