BLASTX nr result

ID: Atractylodes22_contig00045477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045477
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535824.1| PREDICTED: RING-H2 finger protein ATL70-like...    95   2e-19
ref|XP_003519107.1| PREDICTED: RING-H2 finger protein ATL70-like...    96   4e-18
ref|XP_003590313.1| RING finger-like protein [Medicago truncatul...    95   7e-18
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...    86   6e-17

>ref|XP_003535824.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
          Length = 168

 Score = 95.1 bits (235), Expect(2) = 2e-19
 Identities = 53/103 (51%), Positives = 64/103 (62%)
 Frame = +2

Query: 2   LGSQNISGFGYGIGISVGMLLLITTITLASYFCNRTTEXXXXXXXXRIREQTNSLGQALS 181
           LGS N SGFG GIGIS+G+LLLITTITL SYFC R+          R R  +NS  Q L 
Sbjct: 10  LGSNNTSGFGMGIGISIGILLLITTITLTSYFCTRS----QVPTPPRRRTTSNSNPQFL- 64

Query: 182 RPDSTHCVVDVGLDEETLLSYPTMLYKEAKMNKIGIRGLRCVV 310
             +  H +VDVGLDE T+++YP MLY EAK+ K       C +
Sbjct: 65  --EPHHTIVDVGLDEATIMNYPKMLYSEAKLRKFDSTSTSCSI 105



 Score = 25.4 bits (54), Expect(2) = 2e-19
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 295 SSMCCSICLGDYR 333
           +S  CSICLGDY+
Sbjct: 99  TSTSCSICLGDYK 111


>ref|XP_003519107.1| PREDICTED: RING-H2 finger protein ATL70-like [Glycine max]
          Length = 168

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 54/103 (52%), Positives = 64/103 (62%)
 Frame = +2

Query: 2   LGSQNISGFGYGIGISVGMLLLITTITLASYFCNRTTEXXXXXXXXRIREQTNSLGQALS 181
           LGS NISGFG GIGIS+G+LLLITTITL SYFC R           R R  +NS  Q L 
Sbjct: 10  LGSNNISGFGMGIGISIGILLLITTITLTSYFCTRA----QVPTPPRRRGTSNSNPQFL- 64

Query: 182 RPDSTHCVVDVGLDEETLLSYPTMLYKEAKMNKIGIRGLRCVV 310
             +  H +VDVGLDE T+++YP MLY EAK+ K       C +
Sbjct: 65  --EPHHTIVDVGLDEATIMNYPKMLYSEAKLRKSDSTSTSCSI 105


>ref|XP_003590313.1| RING finger-like protein [Medicago truncatula]
           gi|355479361|gb|AES60564.1| RING finger-like protein
           [Medicago truncatula]
          Length = 169

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/102 (49%), Positives = 63/102 (61%)
 Frame = +2

Query: 5   GSQNISGFGYGIGISVGMLLLITTITLASYFCNRTTEXXXXXXXXRIREQTNSLGQALSR 184
           GS +ISGFGYGIGIS+G+LLLITTITL SYFC R+            R   N+  + L  
Sbjct: 12  GSNDISGFGYGIGISIGILLLITTITLTSYFCTRSQVPNPPR-----RRNNNNTSEFL-- 64

Query: 185 PDSTHCVVDVGLDEETLLSYPTMLYKEAKMNKIGIRGLRCVV 310
            +  H ++D GLDEET++SYP MLY E K+NK       C +
Sbjct: 65  -EPQHSILDFGLDEETIMSYPKMLYSEVKLNKYDSTSTCCSI 105


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/103 (50%), Positives = 64/103 (62%)
 Frame = +2

Query: 2   LGSQNISGFGYGIGISVGMLLLITTITLASYFCNRTTEXXXXXXXXRIREQTNSLGQALS 181
           LGS NI GFGYGIG+S+G+LLLITTITLASYFC R  +           +  NS  Q L+
Sbjct: 2   LGSNNIGGFGYGIGVSIGILLLITTITLASYFCARNQQTSVP------SQGRNSADQQLN 55

Query: 182 RPDSTHCVVDVGLDEETLLSYPTMLYKEAKMNKIGIRGLRCVV 310
                  VV++GLDE TL SYPT+LY EAK++K       C +
Sbjct: 56  LQS---FVVEIGLDEATLKSYPTLLYSEAKLHKTDSTSTCCSI 95


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score = 86.3 bits (212), Expect(2) = 6e-17
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   LGSQNISGFGYGIGISVGMLLLITTITLASYFCNRTTEXXXXXXXXRIREQTNSLGQALS 181
           LGS +I GFGYGIG+S+G+LLLITTITLASYFC R  +        R R ++        
Sbjct: 11  LGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRNRSE------E 64

Query: 182 RPDS--THCVVDVGLDEETLLSYPTMLYKEAKMNKIGIRGLRCVV 310
            PD      VV+VG+DE TL +YP +LY +AK++        C +
Sbjct: 65  PPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSI 109



 Score = 25.8 bits (55), Expect(2) = 6e-17
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 295 SSMCCSICLGDYR 333
           ++ CCSICL DY+
Sbjct: 103 TATCCSICLADYK 115


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