BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045428
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD47134.1| RNA polymerase beta subunit [Helianthus annuus]         84   1e-29
gb|ABD47221.1| RNA polymerase beta [Lactuca sativa]                    84   1e-29
ref|YP_398317.1| RNA polymerase beta' subunit [Lactuca sativa] g...    84   1e-29
ref|YP_004564360.1| RNA polymerase beta (chloroplast) [Ageratina...    84   1e-29
ref|YP_588105.2| RNA polymerase beta' subunit [Helianthus annuus...    84   1e-29

>gb|ABD47134.1| RNA polymerase beta subunit [Helianthus annuus]
          Length = 696

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = -2

Query: 144 PLSAEARSEARLLMFSNMNLLSPTIGDPISAPTQDMLSGLYVLTR*NR 1
           PLS EA++EARLLMFS+MNLLSPTIGDPISAPTQDMLSGLYVLT  NR
Sbjct: 507 PLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNR 554



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -1

Query: 253 QVFLPVLVEGRAICLHPLVCKGFNADFDRDQMVVH 149
           Q FLPVLVEGRAICLHPLVCKGFNADFD DQM VH
Sbjct: 471 QAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVH 505


>gb|ABD47221.1| RNA polymerase beta [Lactuca sativa]
          Length = 696

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = -2

Query: 144 PLSAEARSEARLLMFSNMNLLSPTIGDPISAPTQDMLSGLYVLTR*NR 1
           PLS EA++EARLLMFS+MNLLSPTIGDPISAPTQDMLSGLYVLT  NR
Sbjct: 507 PLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNR 554



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -1

Query: 253 QVFLPVLVEGRAICLHPLVCKGFNADFDRDQMVVH 149
           Q FLPVLVEGRAICLHPLVCKGFNADFD DQM VH
Sbjct: 471 QAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVH 505


>ref|YP_398317.1| RNA polymerase beta' subunit [Lactuca sativa]
           gi|85700398|sp|Q56P12.2|RPOC1_LACSA RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|78675156|dbj|BAE47582.1| RNA polymerase beta' subunit
           [Lactuca sativa]
          Length = 689

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = -2

Query: 144 PLSAEARSEARLLMFSNMNLLSPTIGDPISAPTQDMLSGLYVLTR*NR 1
           PLS EA++EARLLMFS+MNLLSPTIGDPISAPTQDMLSGLYVLT  NR
Sbjct: 500 PLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNR 547



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -1

Query: 253 QVFLPVLVEGRAICLHPLVCKGFNADFDRDQMVVH 149
           Q FLPVLVEGRAICLHPLVCKGFNADFD DQM VH
Sbjct: 464 QAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVH 498


>ref|YP_004564360.1| RNA polymerase beta (chloroplast) [Ageratina adenophora]
           gi|334089661|gb|AEG64544.1| RNA polymerase beta
           (chloroplast) [Ageratina adenophora]
          Length = 689

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = -2

Query: 144 PLSAEARSEARLLMFSNMNLLSPTIGDPISAPTQDMLSGLYVLTR*NR 1
           PLS EA++EARLLMFS+MNLLSPTIGDPISAPTQDMLSGLYVLT  NR
Sbjct: 500 PLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNR 547



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -1

Query: 253 QVFLPVLVEGRAICLHPLVCKGFNADFDRDQMVVH 149
           Q FLPVLVEGRAICLHPLVCKGFNADFD DQM VH
Sbjct: 464 QAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVH 498


>ref|YP_588105.2| RNA polymerase beta' subunit [Helianthus annuus]
           gi|125987649|sp|Q1KXX1.2|RPOC1_HELAN RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
          Length = 689

 Score = 83.6 bits (205), Expect(2) = 1e-29
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = -2

Query: 144 PLSAEARSEARLLMFSNMNLLSPTIGDPISAPTQDMLSGLYVLTR*NR 1
           PLS EA++EARLLMFS+MNLLSPTIGDPISAPTQDMLSGLYVLT  NR
Sbjct: 500 PLSLEAQAEARLLMFSHMNLLSPTIGDPISAPTQDMLSGLYVLTSGNR 547



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = -1

Query: 253 QVFLPVLVEGRAICLHPLVCKGFNADFDRDQMVVH 149
           Q FLPVLVEGRAICLHPLVCKGFNADFD DQM VH
Sbjct: 464 QAFLPVLVEGRAICLHPLVCKGFNADFDGDQMAVH 498