BLASTX nr result

ID: Atractylodes22_contig00045424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045424
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_002887482.1| pentatricopeptide repeat-containing protein ...   133   2e-29
ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
emb|CBI37462.3| unnamed protein product [Vitis vinifera]              131   6e-29

>ref|XP_002315827.1| predicted protein [Populus trichocarpa] gi|222864867|gb|EEF01998.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/83 (73%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   IEGMYLAGKVEAAYKFLEDMGNKGYPPDIVTYNCFLKVLCDHKDSGEALRLYRKMIEVGC 180
           IEGM  AGK++ AY+FL++MGNKGYPPDIVTYNCFLKVLC++K+S EALRLY +MIE GC
Sbjct: 287 IEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGC 346

Query: 181 VPSVQTFNMLLMMFFKMDDPNGA 249
            PSVQT NML+ MFF+M DP+GA
Sbjct: 347 FPSVQTHNMLISMFFEMGDPDGA 369


>ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   IEGMYLAGKVEAAYKFLEDMGNKGYPPDIVTYNCFLKVLCDHKDSGEALRLYRKMIEVGC 180
           IEGM + GK++ AYKFLE+MGNK Y PDIVTYNCFLKVLCD+K S +AL+LY +MIE+ C
Sbjct: 281 IEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNC 340

Query: 181 VPSVQTFNMLLMMFFKMDDPNGA 249
           +PSVQT+NML+ MFF+MDDP+GA
Sbjct: 341 IPSVQTYNMLISMFFEMDDPDGA 363


>ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297333323|gb|EFH63741.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 490

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/83 (71%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   IEGMYLAGKVEAAYKFLEDMGNKGYPPDIVTYNCFLKVLCDHKDSGEALRLYRKMIEVGC 180
           IEGM +AGKVE AYKFL++M NKGYPPDIVTYNCFL+VLC+++ S EAL+LY +M+E  C
Sbjct: 281 IEGMCMAGKVEEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRC 340

Query: 181 VPSVQTFNMLLMMFFKMDDPNGA 249
            PSVQT+NML+ MFF+MDDP+GA
Sbjct: 341 APSVQTYNMLISMFFEMDDPDGA 363


>ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Glycine max]
          Length = 466

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/83 (69%), Positives = 73/83 (87%)
 Frame = +1

Query: 1   IEGMYLAGKVEAAYKFLEDMGNKGYPPDIVTYNCFLKVLCDHKDSGEALRLYRKMIEVGC 180
           IEGM + GK++ AYKFLE+MGNK Y PDIVTYNCFLKVLCD+K S +AL+LY +MIE+ C
Sbjct: 281 IEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNC 340

Query: 181 VPSVQTFNMLLMMFFKMDDPNGA 249
           +PSVQT+NML+ MFF++DDP+GA
Sbjct: 341 IPSVQTYNMLISMFFEIDDPDGA 363


>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = +1

Query: 1   IEGMYLAGKVEAAYKFLEDMGNKGYPPDIVTYNCFLKVLCDHKDSGEALRLYRKMIEVGC 180
           IEGM LAGKVE AYKFLE+MGNKGY PDIVTYNCFL VLC++K S EAL LY +MIE GC
Sbjct: 488 IEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGC 547

Query: 181 VPSVQTFNMLLMMFFKMDDPNGA 249
           VPSV TFNML+ MFF++ +P+GA
Sbjct: 548 VPSVHTFNMLISMFFEIGEPDGA 570


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