BLASTX nr result

ID: Atractylodes22_contig00045393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045393
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus ...   133   1e-29
ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-li...   130   1e-28
ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-li...   128   5e-28
emb|CBI19158.3| unnamed protein product [Vitis vinifera]              128   5e-28
ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-li...   125   3e-27

>ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus communis]
           gi|223547003|gb|EEF48500.1| Ribosome-binding protein,
           putative [Ricinus communis]
          Length = 868

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/116 (61%), Positives = 83/116 (71%), Gaps = 18/116 (15%)
 Frame = -3

Query: 302 IEREHTALVNRIRQENDKKEADLKSNHNEELKRVQLQAENEFREKTNLLKNKHE------ 141
           I+ EH ALV RI+QE+D+KE  LK+ H EE+KR QLQAENE REKT  L+N+HE      
Sbjct: 618 IQDEHAALVLRIQQEHDRKEMSLKAGHMEEIKRAQLQAENELREKTTQLRNEHEVQMKAL 677

Query: 140 ------------EELHAQKNKEERQRALLQLQWKVMSDEPQEDQEVTSKKNYTTSS 9
                       EEL  QK+KE+RQRALLQLQWKVMSD PQEDQEVTSKK+Y+ SS
Sbjct: 678 RCQHEDESRRLQEELDLQKSKEDRQRALLQLQWKVMSDRPQEDQEVTSKKDYSVSS 733


>ref|XP_003543761.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/117 (56%), Positives = 85/117 (72%), Gaps = 18/117 (15%)
 Frame = -3

Query: 305 KIEREHTALVNRIRQENDKKEADLKSNHNEELKRVQLQAENEFREKTNLLKNKHE----- 141
           +I+ EHT LV +++QE+DK++A L + HNE+LKR QLQAENE REKT  ++N HE     
Sbjct: 616 RIQDEHTLLVTQMKQEHDKRQASLIAEHNEQLKRTQLQAENELREKTMFMRNDHEAQIKA 675

Query: 140 -------------EELHAQKNKEERQRALLQLQWKVMSDEPQEDQEVTSKKNYTTSS 9
                        EELH QK+KE+RQRALLQLQWKVMSD+P+EDQEV SK++Y+ SS
Sbjct: 676 LRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISS 732


>ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-like [Vitis vinifera]
          Length = 868

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 18/116 (15%)
 Frame = -3

Query: 302 IEREHTALVNRIRQENDKKEADLKSNHNEELKRVQLQAENEFREKTNLLKNKHE------ 141
           I+ EHT L+ RI+QE+D+KE  LK++H+EELKRVQLQAE++ REKT LL+N+HE      
Sbjct: 618 IQEEHTNLITRIQQEHDRKELSLKADHSEELKRVQLQAEDDLREKTILLRNEHEVQIKVL 677

Query: 140 ------------EELHAQKNKEERQRALLQLQWKVMSDEPQEDQEVTSKKNYTTSS 9
                       EEL  QK++E+RQRALLQLQWKVMSD+ QED EV SKK+Y+ SS
Sbjct: 678 RHQHEDECKKLQEELDRQKSREDRQRALLQLQWKVMSDKTQEDPEVNSKKDYSISS 733


>emb|CBI19158.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 18/116 (15%)
 Frame = -3

Query: 302 IEREHTALVNRIRQENDKKEADLKSNHNEELKRVQLQAENEFREKTNLLKNKHE------ 141
           I+ EHT L+ RI+QE+D+KE  LK++H+EELKRVQLQAE++ REKT LL+N+HE      
Sbjct: 618 IQEEHTNLITRIQQEHDRKELSLKADHSEELKRVQLQAEDDLREKTILLRNEHEVQIKVL 677

Query: 140 ------------EELHAQKNKEERQRALLQLQWKVMSDEPQEDQEVTSKKNYTTSS 9
                       EEL  QK++E+RQRALLQLQWKVMSD+ QED EV SKK+Y+ SS
Sbjct: 678 RHQHEDECKKLQEELDRQKSREDRQRALLQLQWKVMSDKTQEDPEVNSKKDYSISS 733


>ref|XP_003544792.1| PREDICTED: synaptonemal complex protein 1-like [Glycine max]
          Length = 866

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/117 (54%), Positives = 82/117 (70%), Gaps = 18/117 (15%)
 Frame = -3

Query: 305 KIEREHTALVNRIRQENDKKEADLKSNHNEELKRVQLQAENEFREKTNLLKNKHE----- 141
           +I+ EH  LV +++QE+DK +  L + HNE+LKR QLQAENE REKT  ++N HE     
Sbjct: 616 RIQEEHALLVTQMKQEHDKMQLSLIAEHNEQLKRTQLQAENELREKTMYMRNDHEAQIKA 675

Query: 140 -------------EELHAQKNKEERQRALLQLQWKVMSDEPQEDQEVTSKKNYTTSS 9
                        EELH QK+KE+RQRALLQLQWKVMSD+P+EDQEV SK++Y+ SS
Sbjct: 676 LRCELEDECQKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISS 732


Top