BLASTX nr result

ID: Atractylodes22_contig00045390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045390
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260...   114   1e-23
ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_004156214.1| PREDICTED: transcription initiation factor T...   103   1e-20
ref|XP_004141587.1| PREDICTED: uncharacterized protein LOC101215...   103   1e-20
gb|ABK27125.1| unknown [Picea sitchensis]                             103   1e-20

>ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260255 [Vitis vinifera]
          Length = 368

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/78 (66%), Positives = 67/78 (85%)
 Frame = +2

Query: 8   RVAADEFGRAIAKVAVAQICERVGFQSFNDSALEALADIAIRYVRDLGKIAKFYSNVANR 187
           R   DEFGRA++K+AVAQICE VGF+ F DSAL+AL++IA+RY+ D+GK A F +N+A R
Sbjct: 19  RAGPDEFGRAVSKIAVAQICESVGFEGFQDSALQALSNIAVRYLCDVGKTANFCANLAGR 78

Query: 188 TECNVFDIIQGLEDLGSS 241
           T+CNVFD+I+GLEDLGSS
Sbjct: 79  TQCNVFDVIRGLEDLGSS 96


>ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|222866906|gb|EEF04037.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/80 (66%), Positives = 67/80 (83%)
 Frame = +2

Query: 2   KNRVAADEFGRAIAKVAVAQICERVGFQSFNDSALEALADIAIRYVRDLGKIAKFYSNVA 181
           K+RV+ DEF RAIAK+AVAQ+CE VGFQSF  SALE L+D+   Y+R+LGK A+FY+N+A
Sbjct: 22  KSRVSGDEFTRAIAKIAVAQMCETVGFQSFQQSALEKLSDVTTWYIRNLGKTAQFYANLA 81

Query: 182 NRTECNVFDIIQGLEDLGSS 241
            RTE NVFD+IQG+E+LG S
Sbjct: 82  GRTEGNVFDVIQGMEELGLS 101


>ref|XP_004156214.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
           [Cucumis sativus]
          Length = 261

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/79 (60%), Positives = 62/79 (78%)
 Frame = +2

Query: 2   KNRVAADEFGRAIAKVAVAQICERVGFQSFNDSALEALADIAIRYVRDLGKIAKFYSNVA 181
           +  + +++F RA+AK+AVAQICE  GFQ F  SALE LAD+A+RYV+++G  A F +N A
Sbjct: 18  RKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANFA 77

Query: 182 NRTECNVFDIIQGLEDLGS 238
            RTECN+FDIIQ LEDLGS
Sbjct: 78  GRTECNLFDIIQALEDLGS 96


>ref|XP_004141587.1| PREDICTED: uncharacterized protein LOC101215115 [Cucumis sativus]
          Length = 376

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/79 (60%), Positives = 62/79 (78%)
 Frame = +2

Query: 2   KNRVAADEFGRAIAKVAVAQICERVGFQSFNDSALEALADIAIRYVRDLGKIAKFYSNVA 181
           +  + +++F RA+AK+AVAQICE  GFQ F  SALE LAD+A+RYV+++G  A F +N A
Sbjct: 18  RKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAVRYVQNMGSTANFCANFA 77

Query: 182 NRTECNVFDIIQGLEDLGS 238
            RTECN+FDIIQ LEDLGS
Sbjct: 78  GRTECNLFDIIQALEDLGS 96


>gb|ABK27125.1| unknown [Picea sitchensis]
          Length = 388

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = +2

Query: 20  DEFGRAIAKVAVAQICERVGFQSFNDSALEALADIAIRYVRDLGKIAKFYSNVANRTECN 199
           D FGRA+A++AVAQICE  GFQS   SALEALADIA+RY+RDLGK A +Y+ +A RTECN
Sbjct: 32  DAFGRAVARIAVAQICEGAGFQSCQQSALEALADIAVRYLRDLGKAAHYYAGLAGRTECN 91

Query: 200 VFDIIQGLEDL 232
            FD+I  +ED+
Sbjct: 92  AFDVIHAMEDM 102


Top