BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045385
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group] g...   144   7e-33
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   142   3e-32
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   139   2e-31
gb|AAA33448.1| reverse transcriptase, partial [Zea mays]              138   4e-31
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr...   138   4e-31

>ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group]
           gi|255672871|dbj|BAF03924.2| Os01g0146700 [Oryza sativa
           Japonica Group]
          Length = 725

 Score =  144 bits (363), Expect = 7e-33
 Identities = 66/103 (64%), Positives = 84/103 (81%)
 Frame = -2

Query: 309 SQQNGKAERAIRTINNVMRTLLFQASLPPKFWAEALNMSIHLLNLLPTTTLSFKSPCEVL 130
           SQQNG+AER++RT+NN++R+LLFQA LPP +W EAL+ +  L+N +PT TLS  +P   L
Sbjct: 238 SQQNGRAERSLRTLNNILRSLLFQACLPPVYWVEALHTATLLVNRIPTKTLSSSTPYFHL 297

Query: 129 YGTFPTFTHLRVFGCLCYPNLSSTAPHKLSPRSTACVYLGPSS 1
           Y T PT+ HLRVFGC CYPN+SSTAPHKL+PRS+ CV+LG SS
Sbjct: 298 YSTQPTYDHLRVFGCACYPNMSSTAPHKLAPRSSLCVFLGYSS 340


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/100 (65%), Positives = 78/100 (78%)
 Frame = -2

Query: 309  SQQNGKAERAIRTINNVMRTLLFQASLPPKFWAEALNMSIHLLNLLPTTTLSFKSPCEVL 130
            S QNGKAER +R+INN+MR+LLFQASLP  FW EAL+ + HL+N  PT  L   +P   L
Sbjct: 767  SPQNGKAERILRSINNIMRSLLFQASLPGTFWVEALHTATHLINRHPTKMLQHHTPFFAL 826

Query: 129  YGTFPTFTHLRVFGCLCYPNLSSTAPHKLSPRSTACVYLG 10
            YG  P++ HLRVFGC CYPNLS+TAPHKLSPRST C++LG
Sbjct: 827  YGVHPSYAHLRVFGCKCYPNLSATAPHKLSPRSTMCIFLG 866


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/100 (62%), Positives = 79/100 (79%)
 Frame = -2

Query: 309  SQQNGKAERAIRTINNVMRTLLFQASLPPKFWAEALNMSIHLLNLLPTTTLSFKSPCEVL 130
            S QNGKAER +R++NN++R++LFQA LP  FW EAL+ + HL+N  PT TL   +P   L
Sbjct: 849  SPQNGKAERILRSLNNIVRSMLFQAKLPGSFWVEALHTATHLINRHPTKTLDRHTPHFAL 908

Query: 129  YGTFPTFTHLRVFGCLCYPNLSSTAPHKLSPRSTACVYLG 10
            YGT P+++HLRVFGC CYPNLS+T PHKL+PRST CV+LG
Sbjct: 909  YGTHPSYSHLRVFGCKCYPNLSATTPHKLAPRSTMCVFLG 948


>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
          Length = 700

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/102 (63%), Positives = 79/102 (77%)
 Frame = -2

Query: 309 SQQNGKAERAIRTINNVMRTLLFQASLPPKFWAEALNMSIHLLNLLPTTTLSFKSPCEVL 130
           S QNG+AER IRT  N++R LLFQASLP  +WAEAL+ + HLLN LP+  +S  +P   L
Sbjct: 30  SAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEALHTATHLLNRLPSKAVSHPTPHFAL 89

Query: 129 YGTFPTFTHLRVFGCLCYPNLSSTAPHKLSPRSTACVYLGPS 4
           YGT P++ HLRVFGC CYPN S+TAPHKLSPRST C++LG S
Sbjct: 90  YGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYS 131


>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
           (fragment)
          Length = 699

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/102 (63%), Positives = 79/102 (77%)
 Frame = -2

Query: 309 SQQNGKAERAIRTINNVMRTLLFQASLPPKFWAEALNMSIHLLNLLPTTTLSFKSPCEVL 130
           S QNG+AER IRT  N++R LLFQASLP  +WAEAL+ + HLLN LP+  +S  +P   L
Sbjct: 30  SAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEALHTATHLLNRLPSKAVSHPTPHFAL 89

Query: 129 YGTFPTFTHLRVFGCLCYPNLSSTAPHKLSPRSTACVYLGPS 4
           YGT P++ HLRVFGC CYPN S+TAPHKLSPRST C++LG S
Sbjct: 90  YGTTPSYDHLRVFGCACYPNTSATAPHKLSPRSTRCLFLGYS 131