BLASTX nr result

ID: Atractylodes22_contig00045171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045171
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   124   1e-26
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   123   1e-26
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   123   1e-26
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   123   1e-26
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         122   4e-26

>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
            copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/104 (58%), Positives = 77/104 (74%)
 Frame = -3

Query: 356  EFEMTDLGLMSYYLGIEVV*REDGIFFSQKKYAIDLLKKFHMFDCNSVRTPVEVGTKLSK 177
            EF+MTD+GLMSYYLG+EV   ++GIF SQ++Y  ++LKKF+M DCN V TP+E G KLSK
Sbjct: 746  EFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKKFNMLDCNPVNTPMEGGLKLSK 805

Query: 176  NDEGAPVDATYFEQIVGSLRYLTCTRPGISYGVGSLRYLFPVPS 45
             DEG  VD+T F+ +VGSLRYLT TRP I Y VG +      P+
Sbjct: 806  FDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRFMEAPT 849


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -3

Query: 359  EEFEMTDLGLMSYYLGIEVV*REDGIFFSQKKYAIDLLKKFHMFDCNSVRTPVEVGTKLS 180
            +EFEMTD+GLMSYYLGIEV   ++GIF +Q+ YA ++LKKF M D N V TP+E G KLS
Sbjct: 1054 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLS 1113

Query: 179  KNDEGAPVDATYFEQIVGSLRYLTCTRPGISYGVGSL-RYL-FPVPSH 42
            K +EG  VD T F+ +VGSLRYLTCTRP I Y VG + RY+  P  +H
Sbjct: 1114 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -3

Query: 359  EEFEMTDLGLMSYYLGIEVV*REDGIFFSQKKYAIDLLKKFHMFDCNSVRTPVEVGTKLS 180
            +EFEMTD+GLMSYYLGIEV   ++GIF +Q+ YA ++LKKF M D N V TP+E G KLS
Sbjct: 1022 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLS 1081

Query: 179  KNDEGAPVDATYFEQIVGSLRYLTCTRPGISYGVGSL-RYL-FPVPSH 42
            K +EG  VD T F+ +VGSLRYLTCTRP I Y VG + RY+  P  +H
Sbjct: 1082 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1129


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/108 (60%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -3

Query: 359  EEFEMTDLGLMSYYLGIEVV*REDGIFFSQKKYAIDLLKKFHMFDCNSVRTPVEVGTKLS 180
            +EFEMTD+GLMSYYLGIEV   ++GIF +Q+ YA ++LKKF M D N V TP+E G KLS
Sbjct: 1054 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLS 1113

Query: 179  KNDEGAPVDATYFEQIVGSLRYLTCTRPGISYGVGSL-RYL-FPVPSH 42
            K +EG  VD T F+ +VGSLRYLTCTRP I Y VG + RY+  P  +H
Sbjct: 1114 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/108 (59%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = -3

Query: 359  EEFEMTDLGLMSYYLGIEVV*REDGIFFSQKKYAIDLLKKFHMFDCNSVRTPVEVGTKLS 180
            +EFEMTD+GLMSYYLGIEV   ++GIF +Q+ YA ++LKKF + D N V TP+E G KLS
Sbjct: 1054 KEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLS 1113

Query: 179  KNDEGAPVDATYFEQIVGSLRYLTCTRPGISYGVGSL-RYL-FPVPSH 42
            K +EG  VD T F+ +VGSLRYLTCTRP I Y VG + RY+  P  +H
Sbjct: 1114 KKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTH 1161


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