BLASTX nr result

ID: Atractylodes22_contig00045142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045142
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...    77   2e-12
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
gb|AAB65486.1| membrane-associated salt-inducible protein isolog...    74   1e-11
ref|NP_172560.2| pentatricopeptide repeat-containing protein [Ar...    74   1e-11

>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/59 (66%), Positives = 44/59 (74%)
 Frame = -3

Query: 505 RYIAQPXXXXXXXXXXEWMPGQGYVVDPSTRNLILKNADLFGRQQTAEILSKQHIMSRA 329
           RYIA+P          +WMPGQGYVVD STRNLILKN+ LFGRQ  AEILSKQH+ S+A
Sbjct: 500 RYIAEPEKKDLLIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQHMTSKA 558


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 43/58 (74%)
 Frame = -3

Query: 505 RYIAQPXXXXXXXXXXEWMPGQGYVVDPSTRNLILKNADLFGRQQTAEILSKQHIMSR 332
           RYIAQP          +WMPG GYVVD STRNLILK++ LFGRQ  AEILSKQHI+S+
Sbjct: 610 RYIAQPEKKDLLVQLLQWMPGHGYVVDASTRNLILKSSHLFGRQLIAEILSKQHIISK 667


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = -3

Query: 505 RYIAQPXXXXXXXXXXEWMPGQGYVVDPSTRNLILKNADLFGRQQTAEILSKQHIMSRA 329
           RYIA+P          +WMPGQGYVVD STRN+ILKN+ LFGRQ  AE+LSKQH  ++A
Sbjct: 597 RYIAEPEKKELLLHLLQWMPGQGYVVDSSTRNMILKNSHLFGRQLIAEMLSKQHARAKA 655


>gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
           [Arabidopsis thaliana]
          Length = 652

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/58 (62%), Positives = 41/58 (70%)
 Frame = -3

Query: 505 RYIAQPXXXXXXXXXXEWMPGQGYVVDPSTRNLILKNADLFGRQQTAEILSKQHIMSR 332
           RYI+QP          +WMPGQGYVVD STRNLILKN+ +FGR   AEILSK H+ SR
Sbjct: 581 RYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLLIAEILSKHHVASR 638


>ref|NP_172560.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122242678|sp|Q0WVV0.1|PPR31_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g10910, chloroplastic; Flags: Precursor
           gi|110741600|dbj|BAE98748.1| membrane-associated
           salt-inducible protein isolog [Arabidopsis thaliana]
           gi|332190541|gb|AEE28662.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 664

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/58 (62%), Positives = 41/58 (70%)
 Frame = -3

Query: 505 RYIAQPXXXXXXXXXXEWMPGQGYVVDPSTRNLILKNADLFGRQQTAEILSKQHIMSR 332
           RYI+QP          +WMPGQGYVVD STRNLILKN+ +FGR   AEILSK H+ SR
Sbjct: 593 RYISQPDKKELLLQLLQWMPGQGYVVDSSTRNLILKNSHMFGRLLIAEILSKHHVASR 650


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