BLASTX nr result

ID: Atractylodes22_contig00045136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045136
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subc...   127   7e-28
emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group]         127   7e-28
gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc...   126   2e-27
gb|ABA98151.1| retrotransposon protein, putative, Ty3-gypsy subc...   126   2e-27
gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subc...   126   2e-27

>gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1319

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/78 (71%), Positives = 73/78 (93%)
 Frame = +3

Query: 3   PAVFMDLMNRIFKDHLDEFVIVFIDDILIYSKSRKAHEEHLRIALEKLRQKQLFAKFSKC 182
           PA FM+LMN++F ++LD+FV+VFIDDILIYSK+++ HEEHLR+ALEKLR++QL+AKFSKC
Sbjct: 674 PAFFMNLMNKVFMEYLDKFVMVFIDDILIYSKTKEEHEEHLRLALEKLREQQLYAKFSKC 733

Query: 183 EFWLRQVSFLGHIISSKG 236
           EFWL +V FLGH+ISS+G
Sbjct: 734 EFWLSEVKFLGHVISSRG 751


>emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group]
          Length = 1659

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/78 (71%), Positives = 72/78 (92%)
 Frame = +3

Query: 3    PAVFMDLMNRIFKDHLDEFVIVFIDDILIYSKSRKAHEEHLRIALEKLRQKQLFAKFSKC 182
            PA FM+LMN++F ++LD+FV+VFIDDILIYSK+++ HEEHLR+ALEKLR+ QL+AKFSKC
Sbjct: 868  PAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKC 927

Query: 183  EFWLRQVSFLGHIISSKG 236
            EFWL +V FLGH+ISS+G
Sbjct: 928  EFWLSEVKFLGHVISSRG 945


>gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1778

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/78 (71%), Positives = 71/78 (91%)
 Frame = +3

Query: 3    PAVFMDLMNRIFKDHLDEFVIVFIDDILIYSKSRKAHEEHLRIALEKLRQKQLFAKFSKC 182
            PA FM+LMN++F ++LD+FV+VFIDDILIYSK+++ HEEHLR+ALEKLR+ QL+AKFSKC
Sbjct: 971  PAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKC 1030

Query: 183  EFWLRQVSFLGHIISSKG 236
            EFWL +V FLGH+ISS G
Sbjct: 1031 EFWLSEVKFLGHVISSGG 1048


>gb|ABA98151.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1281

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/78 (71%), Positives = 71/78 (91%)
 Frame = +3

Query: 3   PAVFMDLMNRIFKDHLDEFVIVFIDDILIYSKSRKAHEEHLRIALEKLRQKQLFAKFSKC 182
           PA FM+LMN++F ++LD+FV+VFIDDILIYSK+++ HEEHLR+ALEKLR+ QL+AKFSKC
Sbjct: 674 PAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKC 733

Query: 183 EFWLRQVSFLGHIISSKG 236
           EFWL +V FLGH+ISS G
Sbjct: 734 EFWLSEVKFLGHVISSGG 751


>gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1702

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/78 (71%), Positives = 71/78 (91%)
 Frame = +3

Query: 3    PAVFMDLMNRIFKDHLDEFVIVFIDDILIYSKSRKAHEEHLRIALEKLRQKQLFAKFSKC 182
            PA FM+LMN++F ++LD+FV+VFIDDILIYSK+++ HEEHLR+ALEKLR+ QL+AKFSKC
Sbjct: 895  PAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKC 954

Query: 183  EFWLRQVSFLGHIISSKG 236
            EFWL +V FLGH+ISS G
Sbjct: 955  EFWLSEVKFLGHVISSGG 972


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