BLASTX nr result

ID: Atractylodes22_contig00045095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045095
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   165   3e-39
ref|XP_004148253.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   165   3e-39
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   160   8e-38
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37

>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/158 (58%), Positives = 105/158 (66%)
 Frame = -2

Query: 474  TFPADLRHEVLLMXXXXXXXXXXXXXXXXAQMLRDRAMSHYHARSLFGSNHXXXXXXXXX 295
            TFPADLR EVLL                 AQMLRDRAMSHY ARSLFGS+H         
Sbjct: 2682 TFPADLREEVLLTSSEAVLSALPSSLLAEAQMLRDRAMSHYQARSLFGSSHRLGNRRNGL 2741

Query: 294  GFDRQAVIDRGVGLTIGRKGSSTLAESLKVKEVEGEPLLDTDALKAFIRLLRLAQPXXXX 115
            GFDRQ V+DRGVG+TIGR+ +S +A+SLK+KE+EGEPLLD  +LKA IRLLRLAQP    
Sbjct: 2742 GFDRQTVMDRGVGVTIGRRAASAIADSLKMKEIEGEPLLDGKSLKALIRLLRLAQPLGKG 2801

Query: 114  XXXXXXXXLCAHSCTREILVYLLLEMIKPGTEGPVGGL 1
                    LCAHS TR  LVYLLL+MIK   EG VGG+
Sbjct: 2802 LLQRLLFNLCAHSVTRASLVYLLLDMIKSEAEGSVGGV 2839


>ref|XP_004148253.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Cucumis sativus]
          Length = 3692

 Score =  165 bits (418), Expect = 3e-39
 Identities = 93/158 (58%), Positives = 105/158 (66%)
 Frame = -2

Query: 474  TFPADLRHEVLLMXXXXXXXXXXXXXXXXAQMLRDRAMSHYHARSLFGSNHXXXXXXXXX 295
            TFPADLR EVLL                 AQMLRDRAMSHY ARSLFGS+H         
Sbjct: 2682 TFPADLREEVLLTSSEAVLSALPSSLLAEAQMLRDRAMSHYQARSLFGSSHRLGNRRNGL 2741

Query: 294  GFDRQAVIDRGVGLTIGRKGSSTLAESLKVKEVEGEPLLDTDALKAFIRLLRLAQPXXXX 115
            GFDRQ V+DRGVG+TIGR+ +S +A+SLK+KE+EGEPLLD  +LKA IRLLRLAQP    
Sbjct: 2742 GFDRQTVMDRGVGVTIGRRAASAIADSLKMKEIEGEPLLDGKSLKALIRLLRLAQPLGKG 2801

Query: 114  XXXXXXXXLCAHSCTREILVYLLLEMIKPGTEGPVGGL 1
                    LCAHS TR  LVYLLL+MIK   EG VGG+
Sbjct: 2802 LLQRLLFNLCAHSVTRASLVYLLLDMIKSEAEGSVGGV 2839


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  165 bits (417), Expect = 4e-39
 Identities = 92/158 (58%), Positives = 106/158 (67%)
 Frame = -2

Query: 474  TFPADLRHEVLLMXXXXXXXXXXXXXXXXAQMLRDRAMSHYHARSLFGSNHXXXXXXXXX 295
            TFPADLR EVLL                 AQMLRDRAMSHY ARSLFGS+H         
Sbjct: 2714 TFPADLREEVLLTSSEAVLSALPSPLLAEAQMLRDRAMSHYQARSLFGSSHRLSSRRNGL 2773

Query: 294  GFDRQAVIDRGVGLTIGRKGSSTLAESLKVKEVEGEPLLDTDALKAFIRLLRLAQPXXXX 115
            GFDRQ V+DRGVG+TIGR+ +ST+A+S++VKE+EG+PLLD +ALKA IRLLRLAQP    
Sbjct: 2774 GFDRQTVMDRGVGVTIGRRATSTIADSMEVKEMEGKPLLDANALKALIRLLRLAQPLGKG 2833

Query: 114  XXXXXXXXLCAHSCTREILVYLLLEMIKPGTEGPVGGL 1
                    LCAHS TR  LV LLL+MIKP  EG + GL
Sbjct: 2834 LLQRLLLNLCAHSTTRATLVRLLLDMIKPEAEGSISGL 2871


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  160 bits (406), Expect = 8e-38
 Identities = 91/155 (58%), Positives = 100/155 (64%)
 Frame = -2

Query: 474  TFPADLRHEVLLMXXXXXXXXXXXXXXXXAQMLRDRAMSHYHARSLFGSNHXXXXXXXXX 295
            TFPADLR EVLL                 AQMLRDRAMSHY ARSLFGS+H         
Sbjct: 2679 TFPADLREEVLLTSSEAVLSALPSPLLAEAQMLRDRAMSHYQARSLFGSSHRLASRRNGL 2738

Query: 294  GFDRQAVIDRGVGLTIGRKGSSTLAESLKVKEVEGEPLLDTDALKAFIRLLRLAQPXXXX 115
            GFDRQ V+DRGVG+TIGR+ +S +A+S+KVKE+EGEPLLD  ALK  IRLLRLAQP    
Sbjct: 2739 GFDRQTVMDRGVGVTIGRRAASAMADSMKVKEIEGEPLLDASALKGLIRLLRLAQPLGKG 2798

Query: 114  XXXXXXXXLCAHSCTREILVYLLLEMIKPGTEGPV 10
                    LCAHS TR  LV LLL MIKP  EG V
Sbjct: 2799 LLQRLLLNLCAHSVTRATLVRLLLNMIKPEAEGSV 2833


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  159 bits (401), Expect = 3e-37
 Identities = 89/158 (56%), Positives = 101/158 (63%)
 Frame = -2

Query: 474  TFPADLRHEVLLMXXXXXXXXXXXXXXXXAQMLRDRAMSHYHARSLFGSNHXXXXXXXXX 295
            TFPAD+R EVLL                 AQMLRDRAMSHY ARSLFGS+H         
Sbjct: 2644 TFPADVREEVLLTSSEAVLSALPSPLLAEAQMLRDRAMSHYQARSLFGSSHRLNSRRNGL 2703

Query: 294  GFDRQAVIDRGVGLTIGRKGSSTLAESLKVKEVEGEPLLDTDALKAFIRLLRLAQPXXXX 115
            GFDRQ V+DRGVG+TIGR+ +S  A+ +K+ E+EGEPLLDT+ALKA I LLR+AQP    
Sbjct: 2704 GFDRQTVMDRGVGVTIGRRAASAFADGMKMNEIEGEPLLDTNALKALIHLLRMAQPLGKG 2763

Query: 114  XXXXXXXXLCAHSCTREILVYLLLEMIKPGTEGPVGGL 1
                    LCAHS TR  LV LLL MIKP  EG V GL
Sbjct: 2764 LLQRLLLNLCAHSTTRTSLVCLLLNMIKPEAEGSVSGL 2801


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