BLASTX nr result

ID: Atractylodes22_contig00045053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045053
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   103   1e-20
emb|CBI38283.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera]   102   4e-20
ref|XP_002339354.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002336224.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
           vinifera]
          Length = 1056

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/109 (51%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
 Frame = -1

Query: 332 SVIKDHDCLTAYKILKQMTNTRYLQLVHRREEPETSNARSTTTWKPYGTPLIFPISSDAI 153
           S IKD D L AYKI K   +T +LQL+HRREE E  NA+ +  WKPYGTPL+ PIS D +
Sbjct: 579 STIKDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDV 638

Query: 152 ITRGDMQLIAHTMLSPLLKPEN------PDTNASSVALDPPSANNGNEA 24
           ITRGD+Q I +TMLSP+L+ E        +T+ S  A DP      +EA
Sbjct: 639 ITRGDIQSIVYTMLSPMLRTERQGHTDISETSISVAASDPSCDITTSEA 687


>emb|CBI38283.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/109 (51%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
 Frame = -1

Query: 332 SVIKDHDCLTAYKILKQMTNTRYLQLVHRREEPETSNARSTTTWKPYGTPLIFPISSDAI 153
           S IKD D L AYKI K   +T +LQL+HRREE E  NA+ +  WKPYGTPL+ PIS D +
Sbjct: 579 STIKDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDV 638

Query: 152 ITRGDMQLIAHTMLSPLLKPEN------PDTNASSVALDPPSANNGNEA 24
           ITRGD+Q I +TMLSP+L+ E        +T+ S  A DP      +EA
Sbjct: 639 ITRGDIQSIVYTMLSPMLRTERQGHTDISETSISVAASDPSCDITTSEA 687


>emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera]
          Length = 1670

 Score =  102 bits (253), Expect = 4e-20
 Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 6/109 (5%)
 Frame = -1

Query: 332  SVIKDHDCLTAYKILKQMTNTRYLQLVHRREEPETSNARSTTTWKPYGTPLIFPISSDAI 153
            S I D D L AYKI K   +T +LQL+HRREE E  NA+ +  WKPYGTPL+ PIS D +
Sbjct: 1251 STINDDDHLAAYKIPKLSKSTIFLQLIHRREEQEIGNAQKSFGWKPYGTPLVSPISCDDV 1310

Query: 152  ITRGDMQLIAHTMLSPLLKPEN------PDTNASSVALDPPSANNGNEA 24
            ITRGD+Q I +TMLSP+L+ E        +T+ S  A DP      +EA
Sbjct: 1311 ITRGDIQSIVYTMLSPMLRTERQGHTDISETSISVAASDPSCDITTSEA 1359


>ref|XP_002339354.1| predicted protein [Populus trichocarpa] gi|222874960|gb|EEF12091.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
 Frame = -1

Query: 332 SVIKDHDCLTAYKILKQMTNTRYLQLVHRREEPETSNARSTTTWKPYGTPLIFPISSDAI 153
           S IKD D L AYKI K +  T  L+L+HR +E ET + ++    KP+GTPL+  IS D +
Sbjct: 18  STIKDDDHLAAYKIAKSLKKTLLLRLIHRCQEQETGDTKAAQKLKPFGTPLVSLISHDDV 77

Query: 152 ITRGDMQLIAHTMLSPLLKPEN------PDTNASSVALDPPSANNGNEADPPP 12
           ITRGD+Q + HTMLSPLL+ E+      P+  +S  A D    ++ +EA   P
Sbjct: 78  ITRGDIQKVVHTMLSPLLRSESLRQADIPEPCSSLAASDMCHHSSSDEACTNP 130


>ref|XP_002336224.1| predicted protein [Populus trichocarpa] gi|222832697|gb|EEE71174.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
 Frame = -1

Query: 332 SVIKDHDCLTAYKILKQMTNTRYLQLVHRREEPETSNARSTTTWKPYGTPLIFPISSDAI 153
           S IKD D L AYKI K +  T  L+L+HR +E ET + ++    KP+GTPL+  IS D +
Sbjct: 373 STIKDDDHLAAYKIAKSLKKTLLLRLIHRCQEQETGDTKAAQKLKPFGTPLVSLISHDDV 432

Query: 152 ITRGDMQLIAHTMLSPLLKPEN------PDTNASSVALDPPSANNGNEADPPP 12
           ITRGD+Q + HTMLSPLL+ E+      P+  +S  A D    ++ +EA   P
Sbjct: 433 ITRGDIQKVVHTMLSPLLRSESLRQADIPEPCSSLAASDMCHHSSSDEACTNP 485


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