BLASTX nr result

ID: Atractylodes22_contig00045034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045034
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]    71   2e-10
gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group...    70   4e-10
gb|ABA95676.1| retrotransposon protein, putative, unclassified [...    70   5e-10
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]    70   5e-10
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    69   1e-09

>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
 Frame = +3

Query: 54  TLKQSTSSVSAYCESMKTVCDSLKSIGEQVTDADLVLQTLQGLNSTYNTFVLNMENAETQ 233
           T K+    +  Y   +KT+ D+L +IGE V + D +LQ L GL S YN+ V ++   E  
Sbjct: 120 TAKKGADPMLEYILKIKTISDNLAAIGEPVKETDHILQLLGGLGSEYNSIVASLTAREDD 179

Query: 234 PTFAQLRSRLIMYEERLAQQ---SEV*P-------PVSAMSALKVENNPPHAASKEVSCQ 383
            +   + + L+ +E+R  Q    S   P       P +  S+    + PPH  ++   CQ
Sbjct: 180 LSLHSIHNILLTHEQRNRQHVPFSHTRPHNRPHNRPANRFSS-SAPHRPPHLPTRP-QCQ 237

Query: 384 ICRKNGHTADKCYFRY 431
           +C K GHT  KCY R+
Sbjct: 238 LCGKFGHTVVKCYHRF 253


>gb|AAO23093.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108709048|gb|ABF96843.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 594

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 36/115 (31%), Positives = 63/115 (54%)
 Frame = +3

Query: 3   YMQNAFAKRSLLKTKFQTLKQSTSSVSAYCESMKTVCDSLKSIGEQVTDADLVLQTLQGL 182
           +  N   +   L  +F ++ Q   SV+ YC+ MKT  D+L+ +   VT++ LVL  L+G+
Sbjct: 124 FQANKEPRTIYLHHEFHSMTQGDLSVADYCQRMKTAADALRDVSHPVTESQLVLNLLRGV 183

Query: 183 NSTYNTFVLNMENAETQPTFAQLRSRLIMYEERLAQQSEV*PPVSAMSALKVENN 347
           NS + +   N+ +A   P+FA  R+ L++ E R A   +V P  + ++A    +N
Sbjct: 184 NSRFTSTADNIASAPVLPSFASARNTLVLKELRNANSVQVQPETALVAANSAHSN 238


>gb|ABA95676.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 215

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 37/115 (32%), Positives = 63/115 (54%)
 Frame = +3

Query: 3   YMQNAFAKRSLLKTKFQTLKQSTSSVSAYCESMKTVCDSLKSIGEQVTDADLVLQTLQGL 182
           +  N   +   L  +F ++ Q   SV+ YC+ MKTV D+L  +G  VT++ LVL  L+G+
Sbjct: 18  FQANKEPRAIYLHHEFHSMTQGDLSVADYCQRMKTVADALHDVGHPVTESQLVLNLLRGV 77

Query: 183 NSTYNTFVLNMENAETQPTFAQLRSRLIMYEERLAQQSEV*PPVSAMSALKVENN 347
           NS + +   N+ +A   P+FA  R+ L++ E R A   +V    + ++A    +N
Sbjct: 78  NSRFTSTADNIASAPVLPSFASARNTLVLKELRNANSVQVQSETALVAANNAHSN 132


>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
          Length = 864

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 33/100 (33%), Positives = 58/100 (58%)
 Frame = +3

Query: 3   YMQNAFAKRSLLKTKFQTLKQSTSSVSAYCESMKTVCDSLKSIGEQVTDADLVLQTLQGL 182
           Y  ++  + + L TK Q  K+   S   Y + +K++C+SL +IGE V++ + ++    GL
Sbjct: 21  YSASSMTRVTELPTKLQMPKKDGLSAGEYIQKLKSICNSLATIGELVSEKNHLIYLFSGL 80

Query: 183 NSTYNTFVLNMENAETQPTFAQLRSRLIMYEERLAQQSEV 302
           +  YN FV +++N   QPT  Q+ S L+ Y+  L QQ+ +
Sbjct: 81  DXEYNPFVTSIQNRSDQPTIEQIHSLLLSYDFHLEQQNSI 120


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
 Frame = +3

Query: 3   YMQNAFAKRSLLKTKFQTLKQSTSSVSAYCESMKTVCDSLKSIGEQVTDADLVLQTLQGL 182
           ++ N+ A+   L+   Q+LK+   S++ Y   M+ + D L + G+ V D DL+L  L GL
Sbjct: 22  FVSNSKARTLQLRFMLQSLKKGALSINDYVLKMRNIADMLSASGKPVPDEDLILYILGGL 81

Query: 183 NSTYNTFVLNMENAETQPTFAQLRSRLIMYEERLAQQSEV*----PPVSAMSALKVENN- 347
              + T V+N+ +     +  ++   L  +E RL Q S       PP + ++   V+N+ 
Sbjct: 82  GPEFETIVVNITSRSEAISLQEVHYLLQSHEIRLEQLSAASVIDVPPAAHITIGGVQNSN 141

Query: 348 ---------------PPHAASKEVS---CQICRKNGHTADKCYFRY 431
                          P +  + + S   CQ+C K GHTA KC+ R+
Sbjct: 142 TNDGQFKSSSSKNFRPRNVCNPQTSRIVCQLCGKMGHTAMKCFHRF 187


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