BLASTX nr result

ID: Atractylodes22_contig00044954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044954
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   112   3e-23
emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]   101   6e-20
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768...   101   7e-20
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]               101   7e-20
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi...   101   7e-20

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/107 (45%), Positives = 72/107 (67%)
 Frame = -1

Query: 321 RMFIVNGYQKDVTGHCLQITDDNAPHVWHKRFGHVNHKAIRTMQYHNMVKGIPQVCGKTL 142
           RMFI++         C Q   ++  H+WH R+GH++ K +RT+QY  MV+G+PQ+   + 
Sbjct: 344 RMFILSARILSKAPTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMVRGLPQLKAPSK 403

Query: 141 VCETCNIGK*SRIAIPKKAIWRSTQRLELVHTDLCGPITPTSQSGKR 1
           +C  C +GK  R AIPK+++WR++QRL+LVH D+CGPI P S S KR
Sbjct: 404 ICTDCMVGKQHRDAIPKRSLWRASQRLQLVHADICGPIKPISNSKKR 450


>emb|CAN68842.1| hypothetical protein VITISV_023226 [Vitis vinifera]
          Length = 1146

 Score =  101 bits (252), Expect = 6e-20
 Identities = 44/107 (41%), Positives = 69/107 (64%)
 Frame = -1

Query: 321 RMFIVNGYQKDVTGHCLQITDDNAPHVWHKRFGHVNHKAIRTMQYHNMVKGIPQVCGKTL 142
           +MFI+          C Q   ++  H+WH R+GH++ K +RT+QY  M +G+PQ+   + 
Sbjct: 642 KMFILLAKILSKASTCFQTILEDNTHLWHCRYGHLSFKGLRTLQYKQMGRGLPQLKAPSK 701

Query: 141 VCETCNIGK*SRIAIPKKAIWRSTQRLELVHTDLCGPITPTSQSGKR 1
           +C  C + K  + AIPK+++WR++QRL+LVH ++CGPI P S S KR
Sbjct: 702 ICTDCMLRKQHKDAIPKRSLWRASQRLQLVHANICGPIKPVSNSKKR 748


>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
           thaliana]
          Length = 1334

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 CLQITDDNAPHVWHKRFGHVNHKAIRTMQYHNMVKGIPQ--VCGKTLVCETCNIGK*SRI 103
           CLQ+    A ++WHKRFGH+NH+ +R++    MVKG+P+  +  +  VC+ C  GK  R 
Sbjct: 424 CLQVIG-KANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 482

Query: 102 AIPKKAIWRSTQRLELVHTDLCGPITPTSQSGKR 1
           +IPK++ W+STQ L+LVHTD+CGPI P S SGKR
Sbjct: 483 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKR 516


>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
          Length = 1207

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 CLQITDDNAPHVWHKRFGHVNHKAIRTMQYHNMVKGIPQ--VCGKTLVCETCNIGK*SRI 103
           CLQ+    A ++WHKRFGH+NH+ +R++    MVKG+P+  +  +  VC+ C  GK  R 
Sbjct: 329 CLQVIG-KANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 387

Query: 102 AIPKKAIWRSTQRLELVHTDLCGPITPTSQSGKR 1
           +IPK++ W+STQ L+LVHTD+CGPI P S SGKR
Sbjct: 388 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKR 421


>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
           gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1334

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/94 (51%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -1

Query: 276 CLQITDDNAPHVWHKRFGHVNHKAIRTMQYHNMVKGIPQ--VCGKTLVCETCNIGK*SRI 103
           CLQ+    A ++WHKRFGH+NH+ +R++    MVKG+P+  +  +  VC+ C  GK  R 
Sbjct: 424 CLQVIG-KANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 482

Query: 102 AIPKKAIWRSTQRLELVHTDLCGPITPTSQSGKR 1
           +IPK++ W+STQ L+LVHTD+CGPI P S SGKR
Sbjct: 483 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKR 516


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