BLASTX nr result

ID: Atractylodes22_contig00044942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044942
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   105   2e-24
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   102   8e-24
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    99   1e-23
ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228...    96   4e-22
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    91   1e-21

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  105 bits (263), Expect(2) = 2e-24
 Identities = 53/74 (71%), Positives = 57/74 (77%)
 Frame = -1

Query: 269 KDEIERLIREMREAGIIQXXXXXXXXXXXXVKKKDGSWRFCVDYRALNKVTVPNKYPIPI 90
           KDEIERLI+EM  AGIIQ            VKKKDGSWRFCVDYRALNK TVP+KYPIP+
Sbjct: 704 KDEIERLIKEMLAAGIIQPSTSPFSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPV 763

Query: 89  IDELLDELKGAQIF 48
           IDELLDEL GA +F
Sbjct: 764 IDELLDELHGATVF 777



 Score = 31.2 bits (69), Expect(2) = 2e-24
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = -2

Query: 49  FSKLDLKSGYHQIRVR 2
           FSKLDL++GYHQI VR
Sbjct: 777 FSKLDLRAGYHQILVR 792


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  102 bits (254), Expect(2) = 8e-24
 Identities = 52/74 (70%), Positives = 56/74 (75%)
 Frame = -1

Query: 269 KDEIERLIREMREAGIIQXXXXXXXXXXXXVKKKDGSWRFCVDYRALNKVTVPNKYPIPI 90
           KDEIE+LI +M  AGIIQ            VKKKDGSWRFCVDYRALN VTVP+KYPIPI
Sbjct: 636 KDEIEQLIHDMLAAGIIQQSHSAFSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPI 695

Query: 89  IDELLDELKGAQIF 48
           IDELLDEL GA +F
Sbjct: 696 IDELLDELHGACVF 709



 Score = 32.7 bits (73), Expect(2) = 8e-24
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = -2

Query: 49  FSKLDLKSGYHQIRVR 2
           FSKLDLKSGYHQI+++
Sbjct: 709 FSKLDLKSGYHQIKMK 724


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 98.6 bits (244), Expect(2) = 1e-23
 Identities = 46/74 (62%), Positives = 58/74 (78%)
 Frame = -1

Query: 269  KDEIERLIREMREAGIIQXXXXXXXXXXXXVKKKDGSWRFCVDYRALNKVTVPNKYPIPI 90
            K+EI+RL++EM EAGI++            VKKKDG WRFC+DYRALNKVTVP+++PIP+
Sbjct: 1252 KNEIKRLVQEMLEAGIVRPSLSPFSSPVLLVKKKDGGWRFCIDYRALNKVTVPDRFPIPV 1311

Query: 89   IDELLDELKGAQIF 48
            IDELLD+L GA IF
Sbjct: 1312 IDELLDKLHGATIF 1325



 Score = 36.2 bits (82), Expect(2) = 1e-23
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 49   FSKLDLKSGYHQIRVR 2
            FSKLDLKSGYHQIRVR
Sbjct: 1325 FSKLDLKSGYHQIRVR 1340


>ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
          Length = 703

 Score = 95.9 bits (237), Expect(2) = 4e-22
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = -1

Query: 269 KDEIERLIREMREAGIIQXXXXXXXXXXXXVKKKDGSWRFCVDYRALNKVTVPNKYPIPI 90
           KDEIE+L+++M  A IIQ            VKKKDGSWRFCVDYRALN  T+P+KYPIP+
Sbjct: 537 KDEIEKLVKKMLLAKIIQPSKSAFSSPVLLVKKKDGSWRFCVDYRALNLATIPDKYPIPV 596

Query: 89  IDELLDELKGAQIF 48
           +DELLDEL GA IF
Sbjct: 597 VDELLDELFGATIF 610



 Score = 33.5 bits (75), Expect(2) = 4e-22
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 49  FSKLDLKSGYHQIRVR 2
           FSK+DLKSGYH IRVR
Sbjct: 610 FSKIDLKSGYHHIRVR 625


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 90.5 bits (223), Expect(2) = 1e-21
 Identities = 42/74 (56%), Positives = 55/74 (74%)
 Frame = -1

Query: 269 KDEIERLIREMREAGIIQXXXXXXXXXXXXVKKKDGSWRFCVDYRALNKVTVPNKYPIPI 90
           K+EIE+ +REM +AGII+            VK+KD SWR C+DYRALNK TVP+K+PIP+
Sbjct: 395 KNEIEKQVREMLQAGIIRHSTSSFSSPVILVKEKDNSWRMCIDYRALNKATVPDKFPIPV 454

Query: 89  IDELLDELKGAQIF 48
           I+ELLDEL GA+ +
Sbjct: 455 IEELLDELHGARFY 468



 Score = 37.7 bits (86), Expect(2) = 1e-21
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = -2

Query: 55  RFFSKLDLKSGYHQIRVR 2
           RF+SKLDLKSGYHQ+RV+
Sbjct: 466 RFYSKLDLKSGYHQVRVK 483


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