BLASTX nr result

ID: Atractylodes22_contig00044794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044794
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   139   2e-31
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002523058.1| pentatricopeptide repeat-containing protein,...   126   2e-27

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/98 (70%), Positives = 80/98 (81%)
 Frame = +3

Query: 3   QLKVALKFYRYTRQLGFPPNVASLNVLIKALSKNSGTMDSAIRIFREMPNHGCTPDTYTY 182
           QLK+AL+FYRY R++G PP+VASLNVLIKAL KNSGTMD+A+RIFREMPN GC PD+YTY
Sbjct: 135 QLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTY 194

Query: 183 GTLINGLCKIGKISEAXXXXXXXXXXGCSPSVVTYTCL 296
           GTLINGLC++GKI EA           CSP+VVTYT L
Sbjct: 195 GTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSL 232


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/98 (67%), Positives = 77/98 (78%)
 Frame = +3

Query: 3   QLKVALKFYRYTRQLGFPPNVASLNVLIKALSKNSGTMDSAIRIFREMPNHGCTPDTYTY 182
           QLK+AL+FYRY R++G PP+VASLNVLIKAL KNSGTMD+A+RIFREMPN GC P +YTY
Sbjct: 135 QLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTY 194

Query: 183 GTLINGLCKIGKISEAXXXXXXXXXXGCSPSVVTYTCL 296
           GTLI GLC++GKI EA           CSP+VVTY  L
Sbjct: 195 GTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSL 232


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/98 (65%), Positives = 74/98 (75%)
 Frame = +3

Query: 3   QLKVALKFYRYTRQLGFPPNVASLNVLIKALSKNSGTMDSAIRIFREMPNHGCTPDTYTY 182
           QLKVA+ FY+Y R++G   +V SLNVLIKAL KNSGT+D+A  IFREMP  GC PD+YTY
Sbjct: 135 QLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTY 194

Query: 183 GTLINGLCKIGKISEAXXXXXXXXXXGCSPSVVTYTCL 296
           GTLINGLCK+GK  EA          GCSPSVVTY+CL
Sbjct: 195 GTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCL 232


>ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
           gi|449484609|ref|XP_004156929.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/98 (62%), Positives = 69/98 (70%)
 Frame = +3

Query: 3   QLKVALKFYRYTRQLGFPPNVASLNVLIKALSKNSGTMDSAIRIFREMPNHGCTPDTYTY 182
           QLK A +FYR  R++G PP V SLNVLIKA  KNSGTMD A+ +FR M NHGC PD+YTY
Sbjct: 164 QLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTY 223

Query: 183 GTLINGLCKIGKISEAXXXXXXXXXXGCSPSVVTYTCL 296
           GTLINGLC+   I EA          GCSPSVVTYT +
Sbjct: 224 GTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSI 261


>ref|XP_002523058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537620|gb|EEF39243.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 286

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/98 (61%), Positives = 73/98 (74%)
 Frame = +3

Query: 3   QLKVALKFYRYTRQLGFPPNVASLNVLIKALSKNSGTMDSAIRIFREMPNHGCTPDTYTY 182
           +LK A++FY++ R++G   +V SLNVLIKAL KNS T+D+A RIF EMPN GC PD+YTY
Sbjct: 135 RLKDAMRFYQHMREMGISASVVSLNVLIKALCKNSSTIDAAFRIFNEMPNRGCNPDSYTY 194

Query: 183 GTLINGLCKIGKISEAXXXXXXXXXXGCSPSVVTYTCL 296
           GTLINGLC+ GKI EA           CSPSVVTY+CL
Sbjct: 195 GTLINGLCRFGKIWEAKELFIEMETKCCSPSVVTYSCL 232


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