BLASTX nr result

ID: Atractylodes22_contig00044792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044792
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30945.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi...   115   7e-24
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]   115   7e-24
ref|XP_003593855.1| Pentatricopeptide repeat-containing protein ...   108   9e-22
ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arab...   107   2e-21

>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  115 bits (288), Expect = 5e-24
 Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 13/130 (10%)
 Frame = +1

Query: 229 KLGANKFRVLNPFGSG----------RDCDSCGEVGEEVDFKFSRDYIGN---GQCFRRV 369
           ++G  + R L  FGSG           D +  G    + D      + G     +  RR 
Sbjct: 94  QMGFGESRDLGHFGSGLDDLDDNEESSDIEEGGNDHNDDDLMVLNSFTGGYRQTEGIRRF 153

Query: 370 ENDGDELRHPLVKEVCRLIDQRSAWTPNLEEELRNLVRSLKPQQVCAVLRCQEDARVALQ 549
           E   DE RHPLV+E+CRLI+ RSAW P LE ELR+L+RSLKP+QVCAVL+ Q D RVAL+
Sbjct: 154 EGGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALR 213

Query: 550 LFYWADRQWR 579
            FYWADRQWR
Sbjct: 214 FFYWADRQWR 223


>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  115 bits (287), Expect = 7e-24
 Identities = 63/129 (48%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
 Frame = +1

Query: 232 LGANKFRVLNPFGSG----------RDCDSCGEVGEEVDFKFSRDYIGN---GQCFRRVE 372
           +G  + R L  FGSG           D +  G    + D      + G     +  RR E
Sbjct: 1   MGFGESRDLGHFGSGLDDLDDNEESSDIEEGGNDHNDDDLMVLNSFTGGYRQTEGIRRFE 60

Query: 373 NDGDELRHPLVKEVCRLIDQRSAWTPNLEEELRNLVRSLKPQQVCAVLRCQEDARVALQL 552
              DE RHPLV+E+CRLI+ RSAW P LE ELR+L+RSLKP+QVCAVL+ Q D RVAL+ 
Sbjct: 61  GGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRF 120

Query: 553 FYWADRQWR 579
           FYWADRQWR
Sbjct: 121 FYWADRQWR 129


>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  115 bits (287), Expect = 7e-24
 Identities = 63/129 (48%), Positives = 77/129 (59%), Gaps = 13/129 (10%)
 Frame = +1

Query: 232 LGANKFRVLNPFGSG----------RDCDSCGEVGEEVDFKFSRDYIGN---GQCFRRVE 372
           +G  + R L  FGSG           D +  G    + D      + G     +  RR E
Sbjct: 1   MGFGESRDLGHFGSGLDDLDDNEESSDIEEGGNDHNDDDLMVLNSFTGGYRQTEGIRRFE 60

Query: 373 NDGDELRHPLVKEVCRLIDQRSAWTPNLEEELRNLVRSLKPQQVCAVLRCQEDARVALQL 552
              DE RHPLV+E+CRLI+ RSAW P LE ELR+L+RSLKP+QVCAVL+ Q D RVAL+ 
Sbjct: 61  GGEDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVLQLQTDERVALRF 120

Query: 553 FYWADRQWR 579
           FYWADRQWR
Sbjct: 121 FYWADRQWR 129


>ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482903|gb|AES64106.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  108 bits (269), Expect = 9e-22
 Identities = 57/111 (51%), Positives = 68/111 (61%), Gaps = 11/111 (9%)
 Frame = +1

Query: 280 DCDSCGEVGE------EVDFKFSRDYIGNG-----QCFRRVENDGDELRHPLVKEVCRLI 426
           D D   EV E      +  F+F   + GNG     +   R E D  E RHP+V+EVCRLI
Sbjct: 82  DLDEEDEVEENGSSDIDESFEFISSFDGNGSNKQRENIARFEIDESEFRHPIVREVCRLI 141

Query: 427 DQRSAWTPNLEEELRNLVRSLKPQQVCAVLRCQEDARVALQLFYWADRQWR 579
             RS W P  EE LR+L+RSL P+ VCAVLR Q+D R+AL  FYWADRQWR
Sbjct: 142 SLRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERIALDFFYWADRQWR 192


>ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata] gi|297339453|gb|EFH69870.1| hypothetical protein
           ARALYDRAFT_336125 [Arabidopsis lyrata subsp. lyrata]
          Length = 814

 Score =  107 bits (266), Expect = 2e-21
 Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
 Frame = +1

Query: 193 QNPKENGCASHDKLGANKFRVLNPFGSGRDCDSCGEVGEEVD-FKFSRDYIGNGQCFRRV 369
           +NP+ N     D+LG ++        SG +CD    V + V     SR+ +G      R 
Sbjct: 85  RNPRFNEI---DELGEDEDDEEGSVTSGDECDDDFAVLKSVGKIPQSREDVG------RF 135

Query: 370 ENDGDELRHPLVKEVCRLIDQRSAWTPNLEEELRNLVRSLKPQQVCAVLRCQEDARVALQ 549
           + + DE RHPLV+E+ RLI  RS+W P  E ++RNL+RSLKP QVCAVLR Q+D RVAL+
Sbjct: 136 DVEEDESRHPLVREIGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALK 195

Query: 550 LFYWADRQWR 579
            FYWADRQWR
Sbjct: 196 FFYWADRQWR 205


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