BLASTX nr result

ID: Atractylodes22_contig00044763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044763
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]                       59   3e-07
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    59   3e-07
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    59   3e-07
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    58   7e-07

>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
 Frame = -2

Query: 334 ACDVFALKKGSWTTSQDFIHNGTKFRDDVGLFVNGYLHWM----ASAYNLVTVIVSLNV- 170
           A +VF LK  SW   Q  IH+G       G+F NG LHW+      A + V VI SL+V 
Sbjct: 179 APEVFTLKTNSWRRIQG-IHSGITLEGGAGVFWNGALHWLGKQETGADHDVDVIFSLDVA 237

Query: 169 KTMVVSMIRVPHDYCCFISSILGILNGCLCMINKCY--DGTFNMWVMKVQGVDNSWSK 2
           +   +  + +P+ +C   +++L I   CLC+  K +  +  F  W+    GV  SW +
Sbjct: 238 QEKFMGFVPLPNHFC---TAVLSISGNCLCIFGKLHPDESYFEAWITSEYGVKTSWRR 292


>dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]
          Length = 241

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
 Frame = -2

Query: 325 VFALKKGSWTT--SQDFIHNGTKFRDDVGLFVNGYLHWM--ASAYNLVTVIVSLNVKTMV 158
           V++LK  SW    + ++ HN   +    G+  NG +HW+   S +N   V+V+ +++T  
Sbjct: 56  VYSLKADSWRRICNLNYEHNDGSYTS--GVHFNGAIHWVFTESRHNQ-RVVVAFDIQTEE 112

Query: 157 VSMIRVPHDY--CC--FISSILGILNGCLCMINKCYDGTFNMWVMKVQGVDNSWSK 2
              + VP +   C   F + ++G LNG LC++N CYD   ++WVM   G   SWS+
Sbjct: 113 FREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 168


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
 Frame = -2

Query: 325 VFALKKGSWTT--SQDFIHNGTKFRDDVGLFVNGYLHWM--ASAYNLVTVIVSLNVKTMV 158
           V++LK  SW    + ++ HN   +    G+  NG +HW+   S +N   V+V+ +++T  
Sbjct: 231 VYSLKADSWRRICNLNYEHNDGSYTS--GVHFNGAIHWVFTESRHNQ-RVVVAFDIQTEE 287

Query: 157 VSMIRVPHDY--CC--FISSILGILNGCLCMINKCYDGTFNMWVMKVQGVDNSWSK 2
              + VP +   C   F + ++G LNG LC++N CYD   ++WVM   G   SWS+
Sbjct: 288 FREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 343


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
 Frame = -2

Query: 325 VFALKKGSWTT--SQDFIHNGTKFRDDVGLFVNGYLHWM--ASAYNLVTVIVSLNVKTMV 158
           V++LK  SW    + ++ HN   +    G+  NG +HW+   S +N   V+V+ +++T  
Sbjct: 242 VYSLKADSWRRICNLNYEHNDGSYTS--GVHFNGAIHWVFTESRHNQ-RVVVAFDIQTEE 298

Query: 157 VSMIRVPHDY--CC--FISSILGILNGCLCMINKCYDGTFNMWVMKVQGVDNSWSK 2
              + VP +   C   F + ++G LNG LC++N CYD   ++WVM   G   SWS+
Sbjct: 299 FREMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSR 354


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/108 (32%), Positives = 58/108 (53%)
 Frame = -2

Query: 325 VFALKKGSWTTSQDFIHNGTKFRDDVGLFVNGYLHWMASAYNLVTVIVSLNVKTMVVSMI 146
           V  L   SW   Q+F  +G  F D+ G FV+G ++W+AS  +   +IVSL++       +
Sbjct: 218 VLTLGTDSWRRIQEF-PSGLPF-DESGKFVSGTVNWLASNDSSSLIIVSLDLHKESYEEV 275

Query: 145 RVPHDYCCFISSILGILNGCLCMINKCYDGTFNMWVMKVQGVDNSWSK 2
             P+     ++  LG+L  CLC+++   D   ++W+MK  G   SW+K
Sbjct: 276 LQPYYGVAVVNLTLGVLRDCLCVLSHA-DTFLDVWLMKDYGNKESWTK 322


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