BLASTX nr result

ID: Atractylodes22_contig00044666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044666
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   187   1e-45
ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   179   3e-43
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-lik...   176   2e-42
ref|XP_002891079.1| hypothetical protein ARALYDRAFT_473569 [Arab...   169   2e-40

>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 438

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/126 (70%), Positives = 110/126 (87%), Gaps = 7/126 (5%)
 Frame = -3

Query: 359 FVALKLMYFGQRFYGFASEAQMDPTIESELFKALEKTRLVLGDKKDLQYSRCGRTDKGVS 180
           +VALK+MYFGQRFYGF+SE QMDPT+ESE+FKALE+TRL++GDKK++QYSRCGRTDKGVS
Sbjct: 103 YVALKVMYFGQRFYGFSSEGQMDPTVESEIFKALERTRLLIGDKKEIQYSRCGRTDKGVS 162

Query: 179 SVGQVVALLLRSKRKE-------HGDSISEEHGDNGELDYVRILNGVLPNDIRVIGWCPA 21
           +VGQV+ALLLRSK K+        G++ S++H + GE+DYVR+LN VLPNDIR+IGWCP 
Sbjct: 163 AVGQVIALLLRSKVKDIDEIGKVFGETASQKHSE-GEIDYVRVLNRVLPNDIRIIGWCPV 221

Query: 20  PVDFSA 3
           P DFSA
Sbjct: 222 PNDFSA 227


>ref|XP_002302151.1| predicted protein [Populus trichocarpa] gi|222843877|gb|EEE81424.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/127 (68%), Positives = 106/127 (83%), Gaps = 8/127 (6%)
 Frame = -3

Query: 359 FVALKLMYFGQRFYGFASEAQMDPTIESELFKALEKTRLVLGDKKDLQYSRCGRTDKGVS 180
           +VALK+MYFGQRFYGF+ EAQMDPT+ESE+FKALE TRL++GD+K++QYSRCGRTDKGVS
Sbjct: 94  YVALKVMYFGQRFYGFSLEAQMDPTVESEIFKALETTRLLIGDRKEIQYSRCGRTDKGVS 153

Query: 179 SVGQVVALLLRSK-------RKEHGDSISEEH-GDNGELDYVRILNGVLPNDIRVIGWCP 24
           +VGQV+AL LRSK        K  G+++ EE  G  GE+DYVR+LNGVLP DIR++GWCP
Sbjct: 154 AVGQVIALYLRSKLKDIDAHNKHSGETVPEEQDGQPGEIDYVRVLNGVLPKDIRIVGWCP 213

Query: 23  APVDFSA 3
            P DFSA
Sbjct: 214 VPSDFSA 220


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/126 (70%), Positives = 107/126 (84%), Gaps = 7/126 (5%)
 Frame = -3

Query: 359 FVALKLMYFGQRFYGFASEAQMDPTIESELFKALEKTRLVLGDKKDLQYSRCGRTDKGVS 180
           +VALK+MYFG+RFYGFASEAQM+PT+ESELFKA EKTRL++G+KK+ QYSRCGRTDKGVS
Sbjct: 83  YVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVS 142

Query: 179 SVGQVVALLLRSKRK----EHGDS---ISEEHGDNGELDYVRILNGVLPNDIRVIGWCPA 21
           SVGQV+AL LRS  K     +G+S   + E+H   GE+DYVR+LN VLPNDIR++GWCPA
Sbjct: 143 SVGQVIALFLRSNLKISETNNGNSGVVLDEQH--EGEIDYVRVLNRVLPNDIRIMGWCPA 200

Query: 20  PVDFSA 3
           PVDF A
Sbjct: 201 PVDFHA 206


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine synthase 3-like [Glycine max]
          Length = 426

 Score =  176 bits (445), Expect = 2e-42
 Identities = 88/126 (69%), Positives = 105/126 (83%), Gaps = 7/126 (5%)
 Frame = -3

Query: 359 FVALKLMYFGQRFYGFASEAQMDPTIESELFKALEKTRLVLGDKKDLQYSRCGRTDKGVS 180
           +VALK+ YFG+RFYGFASEAQM+PT+ESELFKA EKTRL++GDKK+ QYSRCGRTDKGVS
Sbjct: 83  YVALKVTYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVS 142

Query: 179 SVGQVVALLLRSKRK----EHGDS---ISEEHGDNGELDYVRILNGVLPNDIRVIGWCPA 21
           SVGQV+AL LRS  K     +G+S   + E+H   GE+DYV +LN VLPNDIR++GWCPA
Sbjct: 143 SVGQVIALFLRSNLKISATNNGNSGVVLDEQH--EGEIDYVGVLNRVLPNDIRIMGWCPA 200

Query: 20  PVDFSA 3
           PVDF A
Sbjct: 201 PVDFHA 206


>ref|XP_002891079.1| hypothetical protein ARALYDRAFT_473569 [Arabidopsis lyrata subsp.
           lyrata] gi|297336921|gb|EFH67338.1| hypothetical protein
           ARALYDRAFT_473569 [Arabidopsis lyrata subsp. lyrata]
          Length = 443

 Score =  169 bits (429), Expect = 2e-40
 Identities = 85/123 (69%), Positives = 103/123 (83%), Gaps = 4/123 (3%)
 Frame = -3

Query: 359 FVALKLMYFGQRFYGFASEAQMDPTIESELFKALEKTRLVLGDKKDLQYSRCGRTDKGVS 180
           +VALK+MYFG+RFYGF++EAQM+P+IESE+FKALE+TRL++GDKKD  YSRCGRTDKGVS
Sbjct: 91  YVALKIMYFGKRFYGFSAEAQMEPSIESEVFKALERTRLLVGDKKDSCYSRCGRTDKGVS 150

Query: 179 SVGQVVALLLRSKRKE-HGDSISEEHGDNG---ELDYVRILNGVLPNDIRVIGWCPAPVD 12
           S GQV+AL LRS+ K   GDS ++ +G  G   E DYVR+LN  LP+DIRVIGW PAPVD
Sbjct: 151 STGQVIALFLRSRLKSPPGDSKAQVNGKTGERPEYDYVRVLNRALPDDIRVIGWSPAPVD 210

Query: 11  FSA 3
           F A
Sbjct: 211 FHA 213


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