BLASTX nr result

ID: Atractylodes22_contig00044663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044663
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ...   107   2e-34
ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis...   107   8e-33
emb|CBI22472.3| unnamed protein product [Vitis vinifera]              107   1e-32
ref|XP_003610624.1| Histone deacetylase [Medicago truncatula] gi...   105   2e-32
ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1...   104   3e-32

>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
           gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
           putative [Ricinus communis]
          Length = 159

 Score =  107 bits (267), Expect(2) = 2e-34
 Identities = 43/53 (81%), Positives = 49/53 (92%)
 Frame = +3

Query: 279 RCHHPAENWLCLSCKDVLCSRFINKHMLEHYQQQNHSVALSYSDLSVWCFSCN 437
           RC HP+ENWLCLSCKDVLCSRF+NKHML+HY Q +H VALSYSDLSVWCF+C+
Sbjct: 64  RCQHPSENWLCLSCKDVLCSRFVNKHMLQHYHQTHHCVALSYSDLSVWCFACD 116



 Score = 63.2 bits (152), Expect(2) = 2e-34
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 53  EEEEDLMAFYGSESGWVEARTHCDHLDTLSSDLTHIPT 166
           EE+++LM  YGSESGWVEA+T CDHL +LSSDL+HI T
Sbjct: 20  EEDDELMTVYGSESGWVEAKTSCDHLGSLSSDLSHIST 57


>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 154

 Score =  107 bits (266), Expect(2) = 8e-33
 Identities = 42/53 (79%), Positives = 50/53 (94%)
 Frame = +3

Query: 279 RCHHPAENWLCLSCKDVLCSRFINKHMLEHYQQQNHSVALSYSDLSVWCFSCN 437
           RCH+P+ENWLCL CK+VLCSRF+NKHMLEHYQ+ NH +ALSYSDLS+WCFSC+
Sbjct: 59  RCHNPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCD 111



 Score = 58.5 bits (140), Expect(2) = 8e-33
 Identities = 29/47 (61%), Positives = 32/47 (68%)
 Frame = +2

Query: 26  SSRDQSKAEEEEEDLMAFYGSESGWVEARTHCDHLDTLSSDLTHIPT 166
           SS   +  E   ED    YG+ESGWVEART CDHL +LSSDL HIPT
Sbjct: 6   SSSSTALVEVLIEDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPT 52


>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  107 bits (266), Expect(2) = 1e-32
 Identities = 42/53 (79%), Positives = 50/53 (94%)
 Frame = +3

Query: 279 RCHHPAENWLCLSCKDVLCSRFINKHMLEHYQQQNHSVALSYSDLSVWCFSCN 437
           RCH+P+ENWLCL CK+VLCSRF+NKHMLEHYQ+ NH +ALSYSDLS+WCFSC+
Sbjct: 58  RCHNPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCD 110



 Score = 57.8 bits (138), Expect(2) = 1e-32
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +2

Query: 62  EDLMAFYGSESGWVEARTHCDHLDTLSSDLTHIPT 166
           ED    YG+ESGWVEART CDHL +LSSDL HIPT
Sbjct: 17  EDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPT 51


>ref|XP_003610624.1| Histone deacetylase [Medicago truncatula]
           gi|355511959|gb|AES93582.1| Histone deacetylase
           [Medicago truncatula] gi|388516653|gb|AFK46388.1|
           unknown [Medicago truncatula]
          Length = 140

 Score =  105 bits (263), Expect(2) = 2e-32
 Identities = 41/53 (77%), Positives = 50/53 (94%)
 Frame = +3

Query: 279 RCHHPAENWLCLSCKDVLCSRFINKHMLEHYQQQNHSVALSYSDLSVWCFSCN 437
           RC HP+ENWLCLSCKDVLC RF+N+HML+H+++ NHSVALS+SDLSVWCFSC+
Sbjct: 56  RCQHPSENWLCLSCKDVLCGRFVNRHMLQHFRETNHSVALSFSDLSVWCFSCD 108



 Score = 58.5 bits (140), Expect(2) = 2e-32
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 26  SSRDQSKAEEEEEDLMAFYGSESGWVEARTHCDHLDTLSSDLTHIPT 166
           SS  Q +    EED    +GS+SGWV+ART C HL +LS+DLTHIPT
Sbjct: 3   SSSSQPEGGLSEEDYDLIHGSQSGWVDARTSCHHLHSLSNDLTHIPT 49


>ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1|
           unknown [Populus trichocarpa]
           gi|222850311|gb|EEE87858.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  104 bits (259), Expect(2) = 3e-32
 Identities = 40/53 (75%), Positives = 49/53 (92%)
 Frame = +3

Query: 279 RCHHPAENWLCLSCKDVLCSRFINKHMLEHYQQQNHSVALSYSDLSVWCFSCN 437
           RC HP+ENWLCLSCKDVLCSRF+NKHML+H+ Q +H +ALSYSDLS+WCF+C+
Sbjct: 60  RCQHPSENWLCLSCKDVLCSRFVNKHMLQHFHQTSHCLALSYSDLSIWCFACD 112



 Score = 59.3 bits (142), Expect(2) = 3e-32
 Identities = 27/39 (69%), Positives = 32/39 (82%)
 Frame = +2

Query: 50  EEEEEDLMAFYGSESGWVEARTHCDHLDTLSSDLTHIPT 166
           E++E D+   YG+ESGWVEART CDHL +LSSDL HIPT
Sbjct: 18  EDDENDM---YGAESGWVEARTSCDHLASLSSDLAHIPT 53