BLASTX nr result

ID: Atractylodes22_contig00044661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044661
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial pro...   160   8e-38
ref|XP_002519696.1| RNA binding protein, putative [Ricinus commu...   143   1e-32
ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   140   1e-31
ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial pro...   140   1e-31
ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial pro...   140   1e-31

>ref|XP_002269568.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 689

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/117 (65%), Positives = 91/117 (77%)
 Frame = +2

Query: 68  DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTCAHFTGSFPS 247
           DPYSL+KEDP+QV S LWVR+FSN+    FSNLTGFLSK DLWVLAYQR+CAHFTGSFP 
Sbjct: 39  DPYSLMKEDPIQVCSSLWVRSFSNQTHAPFSNLTGFLSKFDLWVLAYQRSCAHFTGSFPP 98

Query: 248 RNAIQLHVLNDLLSLRNAVVQGQFQWNIKTQPYIQNPNDKTPFSKLSNRKLRTISTS 418
           RNAI   VL DLLSL+NAVV+G+F WN K   YI++PN+K      S RK+++I  S
Sbjct: 99  RNAIHSQVLRDLLSLQNAVVRGRFSWNHKIHSYIRSPNEKPLTEFTSKRKIQSILES 155


>ref|XP_002519696.1| RNA binding protein, putative [Ricinus communis]
           gi|223541113|gb|EEF42669.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 681

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/118 (59%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
 Frame = +2

Query: 68  DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTCAHFTGSFPS 247
           DPYSLLK+DP+++ + LWV++FS+   T F NLTGFLSKLDLWVLAYQR+CA  TG+FP 
Sbjct: 31  DPYSLLKQDPIEICTSLWVKSFSSPPNTTFPNLTGFLSKLDLWVLAYQRSCAQVTGTFPP 90

Query: 248 RNAIQLHVLNDLLSLRNAVVQGQFQWNIKTQPYIQNPNDKTPFSKL-SNRKLRTISTS 418
           RNA+    L+ LLSL+NAVV  +F+WN KT+  I++PNDK PF+KL S  KL+ +  S
Sbjct: 91  RNALHSQTLHSLLSLQNAVVHNRFKWNDKTRQIIRSPNDK-PFTKLVSKTKLKAMVNS 147


>ref|XP_004165625.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 697

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 84/117 (71%)
 Frame = +2

Query: 68  DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTCAHFTGSFPS 247
           DPYS LKEDP+ + S +W++ F++   + FS+L+ FLSK DLWVLAYQR+CA  TG+FP 
Sbjct: 55  DPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFPP 114

Query: 248 RNAIQLHVLNDLLSLRNAVVQGQFQWNIKTQPYIQNPNDKTPFSKLSNRKLRTISTS 418
           RNAI  HVL DLLSLRNAV+ G+F WN K    I+ PNDK+    +S RKLR +  S
Sbjct: 115 RNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAMLES 171


>ref|XP_004147417.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 697

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/117 (56%), Positives = 84/117 (71%)
 Frame = +2

Query: 68  DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTCAHFTGSFPS 247
           DPYS LKEDP+ + S +W++ F++   + FS+L+ FLSK DLWVLAYQR+CA  TG+FP 
Sbjct: 55  DPYSHLKEDPIDICSSIWLKAFASLPNSSFSHLSSFLSKFDLWVLAYQRSCADLTGNFPP 114

Query: 248 RNAIQLHVLNDLLSLRNAVVQGQFQWNIKTQPYIQNPNDKTPFSKLSNRKLRTISTS 418
           RNAI  HVL DLLSLRNAV+ G+F WN K    I+ PNDK+    +S RKLR +  S
Sbjct: 115 RNAIHSHVLRDLLSLRNAVINGKFSWNRKANQLIRCPNDKSRTHLISKRKLRAMLES 171


>ref|XP_003547207.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Glycine max]
          Length = 686

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/112 (57%), Positives = 84/112 (75%)
 Frame = +2

Query: 68  DPYSLLKEDPVQVLSDLWVRTFSNKNQTHFSNLTGFLSKLDLWVLAYQRTCAHFTGSFPS 247
           DP+SL+K+DP+++ + LWV+TFS+   T F NLTGFLS  DLW+LAYQR+CAH TG+FP 
Sbjct: 37  DPHSLMKQDPIEICTSLWVKTFSSST-TSFPNLTGFLSNFDLWLLAYQRSCAHATGTFPP 95

Query: 248 RNAIQLHVLNDLLSLRNAVVQGQFQWNIKTQPYIQNPNDKTPFSKLSNRKLR 403
           RNA+   VL+ LLSLRNAV++ +F+WN KT P ++ PND      LS RK R
Sbjct: 96  RNAVHATVLHSLLSLRNAVIRNRFEWNDKTNPLLRAPNDAAVSKPLSKRKFR 147


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