BLASTX nr result

ID: Atractylodes22_contig00044628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044628
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   112   5e-23
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    97   1e-18
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    92   4e-17
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    82   7e-14
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    82   7e-14

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  112 bits (279), Expect = 5e-23
 Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
 Frame = +1

Query: 1   GERYHP-LHQCTKRQMCMLVLGDDEIVDETGEVIAM----ALDEEESTLECNSMGLFAEM 165
           G +YHP  H+C +R + +L+LG+ E + + GE+++M       EEE  +EC  MG+   M
Sbjct: 336 GGKYHPTFHKCLERALRVLILGEGETMTKEGEIVSMKDVTVESEEEVEVECKLMGVLGSM 395

Query: 166 -EQHLPLRPTALRLMGSIGGILVEVLVDIGTSHNFLSSQVATAMRLSILQGNSLGVRLRD 342
            E H       +R+ G I  + + VL+D G SHNF+S +V TA+ L I    +  ++L D
Sbjct: 396 GESH------TMRVEGKIHNVDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGD 449

Query: 343 GH*VVTMRKCNGIKLKLGAFDTIVDAFXXXXXXXXXXXXXAWLQKYGKVTFDWKNRVISF 522
           GH ++T   C G+ +++G  + IVDA              AWL+  G V  DWK   + F
Sbjct: 450 GHRLITNGVCKGVNMQMGGIEVIVDALVLELGGMDMVLGVAWLRTLGNVIMDWKAMTMQF 509


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 5/135 (3%)
 Frame = +1

Query: 1   GERYHP-LHQCTKRQMCMLVLGDDEIVDETGEVIAMAL----DEEESTLECNSMGLFAEM 165
           G +YHP LH+C +R + +L+LG+ E +++ GE++AM       EEE  +EC SMG+   M
Sbjct: 320 GGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAMEAVQPDSEEEIEVECKSMGVLGSM 379

Query: 166 EQHLPLRPTALRLMGSIGGILVEVLVDIGTSHNFLSSQVATAMRLSILQGNSLGVRLRDG 345
            +H       +++ G I  + V VL+D G SHNF+S QV TA+ L+I    +  ++L DG
Sbjct: 380 GEH-----RTMKIEGKIENVDVLVLIDSGASHNFISPQVTTALGLTITASVAKHIKLGDG 434

Query: 346 H*VVTMRKCNGIKLK 390
           H VV+   C G+ L+
Sbjct: 435 HKVVSEGVCYGLNLR 449


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
 Frame = +1

Query: 1   GERYHPLHQCTKRQMCMLVLGDDEIVDETGEVIAMALD-EEESTLECNSMGLFAEMEQHL 177
           G  +HP+HQC  +Q+ +LVL +DE  +  G+++A+ +D EEE   E   M  F     HL
Sbjct: 117 GGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAVEVDDEEEGDGEMCMMEFF-----HL 171

Query: 178 P-LRPTALRLMGSIGGILVEVLVDIGTSHNFLSSQVATAMRLSILQGNSLGVRLRDGH*V 354
              RP +++LMG I  + V VLVD G +HNF+S Q+   M  +++    + ++L DG   
Sbjct: 172 GHSRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLVHKMNWAVVDTPCMSIKLGDGSYS 231

Query: 355 VTMRKCNGIKLKLGAFDTIVDAFXXXXXXXXXXXXXAWLQKYGKVTFDWKNRVISF 522
            T   C G+++ +G     +DA               WL+  G +  +W  + +SF
Sbjct: 232 KTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLRTLGDMIVNWNKQTMSF 287


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 45/133 (33%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
 Frame = +1

Query: 1    GERYHP-LHQCTKRQMCMLVLGDDEIVDETGEVIAM----ALDEEESTLE--CNSMGLFA 159
            G +YHP LH+C ++ + +L+LG+ E V+E GE++++     L+EEE  +E  C  +G+  
Sbjct: 945  GGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEIESECKVIGVLG 1004

Query: 160  EMEQHLPLRPTALRLMGSIGGILVEVLVDIGTSHNFLSSQVATAMRLSILQGNSLGVRLR 339
             M ++       +++ G +  I V VLVD G +HNF+S+++ +A+ L+I    +  ++L 
Sbjct: 1005 SMGEY-----NTMKIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLG 1059

Query: 340  DGH*VVTMRKCNG 378
            DGH V++   C G
Sbjct: 1060 DGHEVLSQGVCKG 1072


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 45/133 (33%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
 Frame = +1

Query: 1   GERYHP-LHQCTKRQMCMLVLGDDEIVDETGEVIAM----ALDEEESTLE--CNSMGLFA 159
           G +YHP LH+C ++ + +L+LG+ E V+E GE++++     L+EEE  +E  C  +G+  
Sbjct: 14  GGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEEEIESECKVIGVLG 73

Query: 160 EMEQHLPLRPTALRLMGSIGGILVEVLVDIGTSHNFLSSQVATAMRLSILQGNSLGVRLR 339
            M ++       +++ G +  I V VLVD G +HNF+S+++ +A+ L+I    +  ++L 
Sbjct: 74  SMGEY-----NTMKIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLG 128

Query: 340 DGH*VVTMRKCNG 378
           DGH V++   C G
Sbjct: 129 DGHEVLSQGVCKG 141


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