BLASTX nr result
ID: Atractylodes22_contig00044577
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00044577
(337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ... 196 2e-48
ref|NP_199046.1| pentatricopeptide repeat-containing protein [Ar... 196 2e-48
dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana] 196 2e-48
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi... 189 2e-46
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi... 185 3e-45
>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311376|gb|EFH41800.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 711
Score = 196 bits (497), Expect = 2e-48
Identities = 97/112 (86%), Positives = 104/112 (92%)
Frame = +1
Query: 1 VTYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRI 180
VT+TTLVDVYGKSGR+NDAIECLE MKS GLKPSSTMYNALINAYAQRGLS QA N FR+
Sbjct: 552 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 611
Query: 181 MSSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
M+SDGLKPS LALN+LINAFGED+RD EAFAVLQYMKENG+K DVVTYTTLM
Sbjct: 612 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 663
Score = 62.8 bits (151), Expect = 3e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y ++D +GK + A+ + M S G++P +N LI+ + + G A F M
Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 508
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
G P N +IN++G+ +R + +L MK G+ +VVT+TTL+
Sbjct: 509 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 558
Score = 60.5 bits (145), Expect = 1e-07
Identities = 33/111 (29%), Positives = 57/111 (51%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
TY+ L+D Y +GR+ A L+ M++ ++P+S +++ L+ Y RG + + M
Sbjct: 378 TYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEM 437
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
S G+KP N +I+ FG+ A M G++ D VT+ TL+
Sbjct: 438 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 488
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/110 (26%), Positives = 53/110 (48%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
++ L+ Y G + + L+ MKS G+KP YN +I+ + + + A TF M
Sbjct: 414 FSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 473
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
S+G++P + N LI+ + R + A + + M+ G TY ++
Sbjct: 474 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 523
>ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like
[Arabidopsis thaliana] gi|332007411|gb|AED94794.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 709
Score = 196 bits (497), Expect = 2e-48
Identities = 97/112 (86%), Positives = 104/112 (92%)
Frame = +1
Query: 1 VTYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRI 180
VT+TTLVDVYGKSGR+NDAIECLE MKS GLKPSSTMYNALINAYAQRGLS QA N FR+
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 181 MSSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
M+SDGLKPS LALN+LINAFGED+RD EAFAVLQYMKENG+K DVVTYTTLM
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 62.8 bits (151), Expect = 3e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y ++D +GK + A+ + M S G++P +N LI+ + + G A F M
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
G P N +IN++G+ +R + +L MK G+ +VVT+TTL+
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
TY+ L+D Y +GR+ A L+ M++ ++P+S +++ L+ + RG + + M
Sbjct: 376 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
S G+KP N +I+ FG+ A M G++ D VT+ TL+
Sbjct: 436 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
>dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 196 bits (497), Expect = 2e-48
Identities = 97/112 (86%), Positives = 104/112 (92%)
Frame = +1
Query: 1 VTYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRI 180
VT+TTLVDVYGKSGR+NDAIECLE MKS GLKPSSTMYNALINAYAQRGLS QA N FR+
Sbjct: 521 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 580
Query: 181 MSSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
M+SDGLKPS LALN+LINAFGED+RD EAFAVLQYMKENG+K DVVTYTTLM
Sbjct: 581 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 632
Score = 62.8 bits (151), Expect = 3e-08
Identities = 33/110 (30%), Positives = 56/110 (50%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y ++D +GK + A+ + M S G++P +N LI+ + + G A F M
Sbjct: 418 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 477
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
G P N +IN++G+ +R + +L MK G+ +VVT+TTL+
Sbjct: 478 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 527
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
TY+ L+D Y +GR+ A L+ M++ ++P+S +++ L+ + RG + + M
Sbjct: 347 TYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 406
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
S G+KP N +I+ FG+ A M G++ D VT+ TL+
Sbjct: 407 KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 457
>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 189 bits (480), Expect = 2e-46
Identities = 93/112 (83%), Positives = 101/112 (90%)
Frame = +1
Query: 1 VTYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRI 180
VTYTTLVD+YG+SGR+ DAIECLEVMKS GLKPSSTMYNALINAYAQRGLS QA N FR+
Sbjct: 537 VTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRV 596
Query: 181 MSSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
M +DGLKPS L LN+LINAFGED+RD EAF+VLQYMKEN LK DVVTYTTLM
Sbjct: 597 MRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 648
Score = 77.0 bits (188), Expect = 1e-12
Identities = 37/110 (33%), Positives = 60/110 (54%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y ++D +GK + A+ + M+ G++P + +N LI+ + + G N+A F M
Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 493
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
G P N +IN+FGE +R + +L M+ GL A+VVTYTTL+
Sbjct: 494 ESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLV 543
Score = 68.2 bits (165), Expect = 7e-10
Identities = 33/111 (29%), Positives = 62/111 (55%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
TY+ L+D Y +GR+ A L+ M+++G++P+S +++ ++ +Y RG ++ R M
Sbjct: 363 TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
+ G+ P N +I+ FG+ A A M+ G++ D VT+ TL+
Sbjct: 423 RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 473
Score = 54.7 bits (130), Expect = 8e-06
Identities = 28/110 (25%), Positives = 56/110 (50%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y L+ Y K+G DA + M+ +G P Y+ LI+AYA G A + M
Sbjct: 329 YNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEME 388
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
+ G++P++ + ++ ++ + + ++F VL+ M+ +G+ D Y ++
Sbjct: 389 ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMI 438
>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 185 bits (470), Expect = 3e-45
Identities = 88/112 (78%), Positives = 102/112 (91%)
Frame = +1
Query: 1 VTYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRI 180
VTYTTLVD+YG SGR+NDAI+CLE MKS GLKPS+TMYNALINA+AQRGLS QA N +R+
Sbjct: 562 VTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRV 621
Query: 181 MSSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
M SDGL+PS LALN+LINAFGED+RD+EAF++LQYMKEN +K DVVTYTTLM
Sbjct: 622 MISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLM 673
Score = 70.5 bits (171), Expect = 1e-10
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = +1
Query: 7 YTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMS 186
Y ++D +GK + A+E + M S G++P +N LI+ + + G ++AA F M
Sbjct: 459 YNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQ 518
Query: 187 SDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
G P N +IN+ GE ++ E +L M+ GL +VVTYTTL+
Sbjct: 519 ERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLV 568
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/111 (28%), Positives = 56/111 (50%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
TY LVD Y GR+ A L+ M++ ++P++ +++ ++ +Y RG + R M
Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
+ +KP N +I+ FG+ A M G++ DVVT+ TL+
Sbjct: 448 KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLI 498
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/103 (31%), Positives = 56/103 (54%)
Frame = +1
Query: 28 YGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIMSSDGLKPS 207
+ K+G N A+ L +++++GL P ++ + A+I+A G + +A F M GLKP
Sbjct: 291 FAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPR 350
Query: 208 NLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
A NAL+ + EA +++ M+++GL D TY L+
Sbjct: 351 IKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLV 393
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/111 (26%), Positives = 52/111 (46%)
Frame = +1
Query: 4 TYTTLVDVYGKSGRYNDAIECLEVMKSTGLKPSSTMYNALINAYAQRGLSNQAANTFRIM 183
T+ ++ G GR +A E MK GLKP +NAL+ YA++G +A + M
Sbjct: 318 TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEM 377
Query: 184 SSDGLKPSNLALNALINAFGEDKRDVEAFAVLQYMKENGLKADVVTYTTLM 336
GL P L++A+ R A +L+ M+ ++ + ++ ++
Sbjct: 378 EKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRIL 428