BLASTX nr result

ID: Atractylodes22_contig00043991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043991
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]   152   3e-35
gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thali...   149   3e-34
gb|AAX95666.1| Reverse transcriptase (RNA-dependent DNA polymera...   149   3e-34
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   148   5e-34
ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [S...   147   7e-34

>emb|CAN70817.1| hypothetical protein VITISV_029336 [Vitis vinifera]
          Length = 1044

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/150 (50%), Positives = 98/150 (65%), Gaps = 4/150 (2%)
 Frame = -1

Query: 442  VAYSRGWDIRQVDVNNAFLHGDLTETVYMSQPPGFVDSTRPD----LKKALYGLKQAPRA 275
            +A   GW ++Q+DVNNAFLHG+LTETVYM QPPGF D +RPD    L+KA+YGLKQ PRA
Sbjct: 618  IAIMNGWPLKQMDVNNAFLHGNLTETVYMMQPPGFKDLSRPDYVCRLRKAIYGLKQGPRA 677

Query: 274  WFAKLSGALIKLGFTQCVSDTSLFVYHSSSVTAYILVYXXXXXXXXXXXXXXXXXIQQLH 95
            W++ L  AL+ LGF    +D+SLFVYH  S+  Y LVY                 + +L 
Sbjct: 678  WYSALKTALLALGFQNSKADSSLFVYHHDSIVCYFLVYVDDLVITGNDKKFVAHVVTKLG 737

Query: 94   SQFSLKDLGQLNYFLGVQAVFSETGLHLSQ 5
             QFSLKD+G L+YFLGV+ + +   + LSQ
Sbjct: 738  DQFSLKDMGSLHYFLGVEVIPTTAVVFLSQ 767


>gb|AAF63122.1|AC009526_7 Hypothetical protein [Arabidopsis thaliana]
          Length = 559

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/146 (52%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
 Frame = -1

Query: 427 GWDIRQVDVNNAFLHGDLTETVYMSQPPGFVDSTRP----DLKKALYGLKQAPRAWFAKL 260
           GWD++Q+DV NAFLHGDLTETVYM QP GFVD  +P     L KALYGLKQAPRAWF K 
Sbjct: 234 GWDVKQMDVKNAFLHGDLTETVYMLQPAGFVDKNKPTHVCHLHKALYGLKQAPRAWFDKF 293

Query: 259 SGALIKLGFTQCVSDTSLFVYHSSSVTAYILVYXXXXXXXXXXXXXXXXXIQQLHSQFSL 80
           S  L++ GF+  V D SLF+Y   +    +L+Y                 ++ L+  F +
Sbjct: 294 SNYLLEFGFSCSVKDLSLFIYIKGNDLILLLLYVDDMVLTGNSSATLAKLLEDLNIHFRM 353

Query: 79  KDLGQLNYFLGVQAVFSETGLHLSQQ 2
           KDLGQ++YFLG+QA F E GL LSQQ
Sbjct: 354 KDLGQMHYFLGIQAHFHENGLFLSQQ 379


>gb|AAX95666.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
           [Oryza sativa Japonica Group]
           gi|108710700|gb|ABF98495.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 757

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/150 (50%), Positives = 96/150 (64%), Gaps = 4/150 (2%)
 Frame = -1

Query: 442 VAYSRGWDIRQVDVNNAFLHGDLTETVYMSQPPGFVDSTRPD----LKKALYGLKQAPRA 275
           +A SRGW +RQ+DV NAFLHG L E VYM QPPGF D T+P     L K+LYGLKQAPRA
Sbjct: 433 IAVSRGWSLRQLDVQNAFLHGHLEEEVYMDQPPGFEDVTKPHYICKLDKSLYGLKQAPRA 492

Query: 274 WFAKLSGALIKLGFTQCVSDTSLFVYHSSSVTAYILVYXXXXXXXXXXXXXXXXXIQQLH 95
           WFA+LS  LI LGF+   +DTSLF  H   +  +ILVY                 +Q L 
Sbjct: 493 WFARLSNKLIDLGFSASKADTSLFFLHKGDIAIFILVYVDDIIVVSSSERATTALLQDLK 552

Query: 94  SQFSLKDLGQLNYFLGVQAVFSETGLHLSQ 5
            +F+LKDLG+L+YFLG++   +  G+ L+Q
Sbjct: 553 VEFALKDLGELHYFLGIEVNKTHNGIVLTQ 582


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/151 (51%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
 Frame = -1

Query: 442  VAYSRGWDIRQVDVNNAFLHGDLTETVYMSQPPGFVDSTRPD----LKKALYGLKQAPRA 275
            +A SR W I Q+DV NAFLHG L ETVY  QPPGFVD TRPD    L K+LYGLKQAPRA
Sbjct: 1179 LAVSRDWPIHQLDVKNAFLHGTLQETVYCIQPPGFVDPTRPDMVCRLNKSLYGLKQAPRA 1238

Query: 274  WFAKLSGALIKLGFTQCVSDTSLFVYHSSSVTAYILVYXXXXXXXXXXXXXXXXXIQQLH 95
            W+++ +  L+ +GFT+  SDTSLFV H  S   Y+L+Y                 I  L 
Sbjct: 1239 WYSRFATFLLSIGFTEAKSDTSLFVLHRDSGIVYLLLYVDDIVLTASSAQLLQWTISSLQ 1298

Query: 94   SQFSLKDLGQLNYFLGVQAVFSETGLHLSQQ 2
            S+FS+KDLG L++FLGV     +TGL L Q+
Sbjct: 1299 SEFSMKDLGALHHFLGVTVTRRDTGLLLHQR 1329


>ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [Sorghum bicolor]
           gi|241940898|gb|EES14043.1| hypothetical protein
           SORBIDRAFT_07g023610 [Sorghum bicolor]
          Length = 791

 Score =  147 bits (372), Expect = 7e-34
 Identities = 78/151 (51%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
 Frame = -1

Query: 442 VAYSRGWDIRQVDVNNAFLHGDLTETVYMSQPPGFVDSTRPDL----KKALYGLKQAPRA 275
           VA  R W + Q+DV NAFLHG LTETVY SQP GFVDS+RPDL     K+LYGLKQAPRA
Sbjct: 379 VALERSWPVHQLDVKNAFLHGTLTETVYCSQPAGFVDSSRPDLVCRLNKSLYGLKQAPRA 438

Query: 274 WFAKLSGALIKLGFTQCVSDTSLFVYHSSSVTAYILVYXXXXXXXXXXXXXXXXXIQQLH 95
           W+++ S  L  LGFT+  SDTSLF+YH    TAY+L+Y                 I  L 
Sbjct: 439 WYSRFSTFLQTLGFTEAKSDTSLFIYHHGGETAYLLLYVDDIVLTACSESLLQRIITTLQ 498

Query: 94  SQFSLKDLGQLNYFLGVQAVFSETGLHLSQQ 2
            +F++KDLG L++FLGV      +GL L Q+
Sbjct: 499 KEFAMKDLGVLHHFLGVTVEPRPSGLFLHQR 529


Top