BLASTX nr result

ID: Atractylodes22_contig00043951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043951
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]          67   2e-09
gb|ABA94730.1| retrotransposon protein, putative, unclassified [...    65   4e-09
emb|CAN81293.1| hypothetical protein VITISV_003262 [Vitis vinifera]    63   2e-08
emb|CAN68289.1| hypothetical protein VITISV_019714 [Vitis vinifera]    63   2e-08
emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]    62   4e-08

>gb|ABG22120.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 349

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 4/59 (6%)
 Frame = +2

Query: 56  IVLDNCLPCSF----KLINASVVKRIFRYLKGTPSLGLWYPKDYGFKLICYSDADHAGC 220
           I+   CL   +    K  + + VKRIFRYLKGTP+LGLWYPKD GF L  +SD+++AGC
Sbjct: 198 IMFSTCLCARYQANPKESHLAAVKRIFRYLKGTPNLGLWYPKDSGFDLTGFSDSNYAGC 256


>gb|ABA94730.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1890

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
 Frame = +2

Query: 47   HHGIVLDNCLPCSF----KLINASVVKRIFRYLKGTPSLGLWYPKDYGFKLICYSDADHA 214
            H  I+L  C+   F    K  +  VVKRI RYL  TP+LGLWYPK  GF+L+ YSD+D+A
Sbjct: 1438 HPDIMLSVCMRARFQAEPKECHLVVVKRILRYLVHTPNLGLWYPKGCGFELLGYSDSDYA 1497

Query: 215  GC 220
            GC
Sbjct: 1498 GC 1499


>emb|CAN81293.1| hypothetical protein VITISV_003262 [Vitis vinifera]
          Length = 620

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = +2

Query: 56  IVLDNCLPCSF----KLINASVVKRIFRYLKGTPSLGLWYPKDYGFKLICYSDADHAGC 220
           I+   CL   F    K  + SVVKRI RYLKGT  +GLWYPK   F+LI YSDAD AGC
Sbjct: 116 IMYSVCLYARFQSCPKESHLSVVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFAGC 174


>emb|CAN68289.1| hypothetical protein VITISV_019714 [Vitis vinifera]
          Length = 216

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = +2

Query: 56  IVLDNCLPCSF----KLINASVVKRIFRYLKGTPSLGLWYPKDYGFKLICYSDADHAGC 220
           I+   CL   F    K  + SVVKRI RYLKGT  +GLWYPK   F+LI YSDAD AGC
Sbjct: 84  IMYSVCLCARFQSCPKESHLSVVKRILRYLKGTMDIGLWYPKGDNFELIGYSDADFAGC 142


>emb|CAN67730.1| hypothetical protein VITISV_044473 [Vitis vinifera]
          Length = 669

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = +2

Query: 56  IVLDNCLPCSF----KLINASVVKRIFRYLKGTPSLGLWYPKDYGFKLICYSDADHAGC 220
           I+   CL   F    K  + S VKRIFRYLKGT  +GLWYPK   F+LI +SDAD AGC
Sbjct: 255 IMYSVCLCARFQSCLKESHLSAVKRIFRYLKGTIDIGLWYPKSDNFELIGFSDADFAGC 313


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