BLASTX nr result

ID: Atractylodes22_contig00043929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043929
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ...   179   2e-43
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]   179   2e-43
ref|XP_003622422.1| Pentatricopeptide repeat-containing protein ...   174   5e-42

>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
           protein product [Vitis vinifera]
          Length = 687

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/109 (83%), Positives = 101/109 (92%)
 Frame = +2

Query: 2   SNAIYKFLNNMGDKMRQAGYLPDTEFVLQDLDLEEKEDTLCNHSEKLAVAFGILNLNGES 181
           S+ IY+FL+ MG+KMR AGYLP+T+FVLQD+D EEKE+ LCNHSEKLAVAFG+LNLNGES
Sbjct: 577 SDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGES 636

Query: 182 SITVFKNLRICGDCHNAIKFMAKIVGVTIIVRDSLRFHHFRDGHCSCKD 328
           SI VFKNLRICGDCHNAIKFMAKIVGV IIVRDSLRFHHFRDG CSC+D
Sbjct: 637 SIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQD 685


>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  183 bits (464), Expect = 1e-44
 Identities = 82/109 (75%), Positives = 101/109 (92%)
 Frame = +2

Query: 2   SNAIYKFLNNMGDKMRQAGYLPDTEFVLQDLDLEEKEDTLCNHSEKLAVAFGILNLNGES 181
           S+ IY FL+ +G+KM+ AGY PDT++VLQD+D EEK ++LC+HSEKLAVAFGILNLNG+S
Sbjct: 631 SDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQS 690

Query: 182 SITVFKNLRICGDCHNAIKFMAKIVGVTIIVRDSLRFHHFRDGHCSCKD 328
           SI VFKNLRICGDCHNAIK+++K+VGVTIIVRDSLRFHHFR+G+CSC+D
Sbjct: 691 SIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQD 739


>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498869|gb|AES80072.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/109 (73%), Positives = 99/109 (90%)
 Frame = +2

Query: 2   SNAIYKFLNNMGDKMRQAGYLPDTEFVLQDLDLEEKEDTLCNHSEKLAVAFGILNLNGES 181
           S+ IY FL+ + +KM+ AGY PDT++VLQD+D EEK ++LCNHSEKLAVAFGILNLNG+S
Sbjct: 663 SDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 722

Query: 182 SITVFKNLRICGDCHNAIKFMAKIVGVTIIVRDSLRFHHFRDGHCSCKD 328
           +I VFKNLRICGDCHNAIK+M+K+VGV I+VRDSLRFHHF++G+CSCKD
Sbjct: 723 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKD 771


>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  179 bits (455), Expect = 2e-43
 Identities = 80/109 (73%), Positives = 99/109 (90%)
 Frame = +2

Query: 2   SNAIYKFLNNMGDKMRQAGYLPDTEFVLQDLDLEEKEDTLCNHSEKLAVAFGILNLNGES 181
           S+ IY FL+ + +KM+ AGY PDT++VLQD+D EEK ++LCNHSEKLAVAFGILNLNG+S
Sbjct: 577 SDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 636

Query: 182 SITVFKNLRICGDCHNAIKFMAKIVGVTIIVRDSLRFHHFRDGHCSCKD 328
           +I VFKNLRICGDCHNAIK+M+K+VGV I+VRDSLRFHHF++G+CSCKD
Sbjct: 637 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKD 685


>ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355497437|gb|AES78640.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  174 bits (442), Expect = 5e-42
 Identities = 78/109 (71%), Positives = 97/109 (88%)
 Frame = +2

Query: 2    SNAIYKFLNNMGDKMRQAGYLPDTEFVLQDLDLEEKEDTLCNHSEKLAVAFGILNLNGES 181
            S+ IY FL+ +  K++ AGY PDT++VL D+D EEK ++LCNHSEKLAVAFGILNLNG+S
Sbjct: 842  SDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQS 901

Query: 182  SITVFKNLRICGDCHNAIKFMAKIVGVTIIVRDSLRFHHFRDGHCSCKD 328
            +I VFKNLRICGDCHNAIK+M+ +VGVTI+VRDSLRFHHF++G+CSCKD
Sbjct: 902  TIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKD 950