BLASTX nr result

ID: Atractylodes22_contig00043896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043896
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   102   4e-20
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   101   7e-20
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    97   1e-18
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    66   3e-09
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    55   6e-06

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/120 (42%), Positives = 71/120 (59%)
 Frame = -2

Query: 466  LSMAGAAQHWFTVVKEVYPDXXXXXXXXXXXQRFSGLEIQNPYEQLATLTQEGSIYDYID 287
            LSM G   HWF ++ E   D            R+ G  ++NP+E+L+TL Q GS+ ++++
Sbjct: 784  LSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRRLENPFEELSTLRQIGSVEEFVE 843

Query: 286  EFEYLLSFVPRLPESQSMGYFIAGLKDDVKRWVRLHRPQTRLDAMYLAKDVESMLNPSAD 107
             FE L S V RLPE Q +GYF++GLK  ++R VR   P TR+  M +AKDVE  LN   D
Sbjct: 844  AFELLSSQVGRLPEEQYLGYFMSGLKAHIRRRVRTLNPTTRMQMMRIAKDVEDELNEEDD 903


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/125 (39%), Positives = 75/125 (60%)
 Frame = -2

Query: 466 LSMAGAAQHWFTVVKEVYPDXXXXXXXXXXXQRFSGLEIQNPYEQLATLTQEGSIYDYID 287
           LSM G+  HWF ++ E   +            R+ G  ++NP+E+L+TL Q+GS+ ++++
Sbjct: 111 LSMEGSTIHWFNLLMETEDELSWENLKRALIARYGGRRLENPFEELSTLRQKGSVEEFVE 170

Query: 286 EFEYLLSFVPRLPESQSMGYFIAGLKDDVKRWVRLHRPQTRLDAMYLAKDVESMLNPSAD 107
            FE L S V RLPE Q +GYF++GLK  ++R VR   P+ R++ M +AKDVE  L    D
Sbjct: 171 AFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPRNRMEMMRIAKDVEDELKEEDD 230

Query: 106 AVANR 92
              +R
Sbjct: 231 EGEHR 235


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/115 (40%), Positives = 70/115 (60%)
 Frame = -2

Query: 466 LSMAGAAQHWFTVVKEVYPDXXXXXXXXXXXQRFSGLEIQNPYEQLATLTQEGSIYDYID 287
           LSM G+  HWF ++ E   +            R+ G  ++NP+E+L+T+ Q+GS+ ++++
Sbjct: 94  LSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGRRLENPFEELSTIRQKGSVEEFVE 153

Query: 286 EFEYLLSFVPRLPESQSMGYFIAGLKDDVKRWVRLHRPQTRLDAMYLAKDVESML 122
            FE L S V RLPE Q +GYF++GLK  ++R VR   P  R+  M +AKDVE  L
Sbjct: 154 AFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNPLNRMQMMRIAKDVEEEL 208


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/94 (37%), Positives = 53/94 (56%)
 Frame = -2

Query: 466 LSMAGAAQHWFTVVKEVYPDXXXXXXXXXXXQRFSGLEIQNPYEQLATLTQEGSIYDYID 287
           L M G   H+F  + E               +R+ G+   N +EQL+ L QEG+I +YI 
Sbjct: 121 LCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIA 180

Query: 286 EFEYLLSFVPRLPESQSMGYFIAGLKDDVKRWVR 185
           +FE L++ +P+LP  Q +GYF+ GLKD ++  VR
Sbjct: 181 DFERLVAQLPKLPNDQYLGYFVHGLKDKIRGKVR 214


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/107 (32%), Positives = 55/107 (51%)
 Frame = -2

Query: 460 MAGAAQHWFTVVKEVYPDXXXXXXXXXXXQRFSGLEIQNPYEQLATLTQEGSIYDYIDEF 281
           + G AQ W+ ++KE   +            R+   E  + +  L  L Q GS+ +Y  +F
Sbjct: 197 LEGEAQLWYQILKEE-GEVAWLTLKEGLNSRYGPTEFDDFFGDLTRLKQVGSVREYQSQF 255

Query: 280 EYLLSFVPRLPESQSMGYFIAGLKDDVKRWVRLHRPQTRLDAMYLAK 140
           E LLS V +L +SQ +  FI GL +DV+  V+  +P T   A+ LA+
Sbjct: 256 EKLLSRVGKLNQSQQVACFIGGLNEDVRIDVQAMKPPTLSAAVGLAR 302


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