BLASTX nr result

ID: Atractylodes22_contig00043895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043895
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   127   9e-28
emb|CBI29975.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   120   9e-26
emb|CAN73494.1| hypothetical protein VITISV_044261 [Vitis vinifera]   120   9e-26
ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24

>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/115 (57%), Positives = 80/115 (69%)
 Frame = -1

Query: 347 VVQQQVWSRETMPKVMKIISTRLRLPQPDXXXXXXXXXXXXXXXXXXXSLWLVLDFHEMN 168
           V ++Q WSRET+PKVMKI+ST +   Q D                   SLWL LDF EMN
Sbjct: 6   VEEEQTWSRETIPKVMKIVSTTIS--QKDVISLLLVSPWLHHSLISYPSLWLALDFREMN 63

Query: 167 NAGDRLVAALALTRYDHVKQINLEFAQDVEDRHLDILRNQFSGSLQNLEHLNLNG 3
            AGDRL++AL+L RY HVKQINLEFAQD+EDRHL +++++ S SLQNLE LNLNG
Sbjct: 64  KAGDRLISALSLPRYRHVKQINLEFAQDIEDRHLQVIQSKASSSLQNLESLNLNG 118


>emb|CBI29975.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/108 (59%), Positives = 75/108 (69%)
 Frame = -1

Query: 329 WSRETMPKVMKIISTRLRLPQPDXXXXXXXXXXXXXXXXXXXSLWLVLDFHEMNNAGDRL 150
           WSRET+PKV++I+ TRL  PQ D                   SLWLVLDF E NNAG+RL
Sbjct: 14  WSRETIPKVLRIVGTRL--PQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNRL 71

Query: 149 VAALALTRYDHVKQINLEFAQDVEDRHLDILRNQFSGSLQNLEHLNLN 6
           VAAL+L RY HVKQINLEFAQD+ED+HLD+L+ +   SLQ LE LNLN
Sbjct: 72  VAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTKCLDSLQELESLNLN 119


>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/108 (59%), Positives = 75/108 (69%)
 Frame = -1

Query: 329 WSRETMPKVMKIISTRLRLPQPDXXXXXXXXXXXXXXXXXXXSLWLVLDFHEMNNAGDRL 150
           WSRET+PKV++I+ TRL  PQ D                   SLWLVLDF E NNAG+RL
Sbjct: 14  WSRETIPKVLRIVGTRL--PQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNRL 71

Query: 149 VAALALTRYDHVKQINLEFAQDVEDRHLDILRNQFSGSLQNLEHLNLN 6
           VAAL+L RY HVKQINLEFAQD+ED+HLD+L+ +   SLQ LE LNLN
Sbjct: 72  VAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTKCLDSLQELESLNLN 119


>emb|CAN73494.1| hypothetical protein VITISV_044261 [Vitis vinifera]
          Length = 349

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/108 (59%), Positives = 75/108 (69%)
 Frame = -1

Query: 329 WSRETMPKVMKIISTRLRLPQPDXXXXXXXXXXXXXXXXXXXSLWLVLDFHEMNNAGDRL 150
           WSRET+PKV++I+ TRL  PQ D                   SLWLVLDF E NNAG+RL
Sbjct: 14  WSRETIPKVLRIVGTRL--PQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNRL 71

Query: 149 VAALALTRYDHVKQINLEFAQDVEDRHLDILRNQFSGSLQNLEHLNLN 6
           VAAL+L RY HVKQINLEFAQD+ED+HLD+L+ +   SLQ LE LNLN
Sbjct: 72  VAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTKCLDSLQELESLNLN 119


>ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/109 (54%), Positives = 73/109 (66%)
 Frame = -1

Query: 329 WSRETMPKVMKIISTRLRLPQPDXXXXXXXXXXXXXXXXXXXSLWLVLDFHEMNNAGDRL 150
           W+ ET+PKVMKI+ST+L  PQ D                    LW+ LDF EMN AGDRL
Sbjct: 2   WNTETIPKVMKIVSTKL--PQRDLISLLLVSPWLYRTLTSFPPLWMALDFREMNKAGDRL 59

Query: 149 VAALALTRYDHVKQINLEFAQDVEDRHLDILRNQFSGSLQNLEHLNLNG 3
           +AA +L RY HVK+INLEFAQD+ED HL++L+++   SLQ LE LNLNG
Sbjct: 60  IAATSLPRYQHVKEINLEFAQDIEDEHLEVLQSKCFVSLQKLESLNLNG 108


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