BLASTX nr result

ID: Atractylodes22_contig00043888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043888
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22564.3| unnamed protein product [Vitis vinifera]               91   1e-16
gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]               86   2e-15
ref|NP_176757.1| DNA helicase domain-containing protein [Arabido...    86   2e-15
ref|NP_001185324.1| DNA helicase domain-containing protein [Arab...    86   2e-15
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...    86   3e-15

>emb|CBI22564.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/96 (45%), Positives = 64/96 (66%)
 Frame = +3

Query: 78  RKSKTKNPKLIDVVFSWSVDDVLNTHLYSNKVNRIPETFSSTNHYTQSFLEPLLEETHAA 257
           RK++  +  L+D+VFSWS+ DVL   L+ NKV +IP+TF ST+HY  SF+ PL+EETHA 
Sbjct: 7   RKAENADRSLVDLVFSWSLRDVLYKDLHRNKVRKIPDTFLSTSHYLTSFINPLIEETHAD 66

Query: 258 LLSKIRTISLASTRGIIGVSENQKFYSPKYYFYSIS 365
           L S + T++ A    ++ V  ++ F  P+  FY IS
Sbjct: 67  LSSSMTTLARAPICEVLSVKISKDFKPPRDLFYEIS 102


>gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
          Length = 1075

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = +3

Query: 72  TSRKSKT-KNPKLIDVVFSWSVDDVLNTHLYSNKVNRIPETFSSTNHYTQSFLEPLLEET 248
           T +K K  K   L+DVVFSWS+ DVLN++LY  +V +IP TF+ST  Y +SF++P++EET
Sbjct: 10  TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEET 69

Query: 249 HAALLSKIRTISLASTRGIIGVSENQKFYSPKYYFYSIS 365
           HA LLS + TI  A       +   + F  P+  +Y ++
Sbjct: 70  HADLLSSMGTIRRAQAFKFWEIKPGKDFKPPRDLYYEVT 108


>ref|NP_176757.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
           gi|332196304|gb|AEE34425.1| DNA helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1050

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = +3

Query: 72  TSRKSKT-KNPKLIDVVFSWSVDDVLNTHLYSNKVNRIPETFSSTNHYTQSFLEPLLEET 248
           T +K K  K   L+DVVFSWS+ DVLN++LY  +V +IP TF+ST  Y +SF++P++EET
Sbjct: 10  TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEET 69

Query: 249 HAALLSKIRTISLASTRGIIGVSENQKFYSPKYYFYSIS 365
           HA LLS + TI  A       +   + F  P+  +Y ++
Sbjct: 70  HADLLSSMGTIRRAQAFKFWEIKPGKDFKPPRDLYYEVT 108


>ref|NP_001185324.1| DNA helicase domain-containing protein [Arabidopsis thaliana]
           gi|332196305|gb|AEE34426.1| DNA helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 1016

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = +3

Query: 72  TSRKSKT-KNPKLIDVVFSWSVDDVLNTHLYSNKVNRIPETFSSTNHYTQSFLEPLLEET 248
           T +K K  K   L+DVVFSWS+ DVLN++LY  +V +IP TF+ST  Y +SF++P++EET
Sbjct: 10  TKKKEKIIKGRDLVDVVFSWSLRDVLNSNLYRGQVGKIPNTFTSTKEYFESFVKPIIEET 69

Query: 249 HAALLSKIRTISLASTRGIIGVSENQKFYSPKYYFYSIS 365
           HA LLS + TI  A       +   + F  P+  +Y ++
Sbjct: 70  HADLLSSMGTIRRAQAFKFWEIKPGKDFKPPRDLYYEVT 108


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517466|gb|AES99089.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 950

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +3

Query: 108 IDVVFSWSVDDVLNTHLYSNKVNRIPETFSSTNHYTQSFLEPLLEETHAALLSKIRTISL 287
           +D+VFSWS+ DVLN ++Y NKV +IPETF+S   Y  SF+ PLLEETH+ L S +  +S 
Sbjct: 23  LDIVFSWSIKDVLNQNIYRNKVKKIPETFNSPTDYKNSFIPPLLEETHSDLYSNLLGVSH 82

Query: 288 ASTRGIIGVS-ENQKFYSPKYYFYSIS 365
           A    ++ V  E+++F  PK  FY IS
Sbjct: 83  APFCEVLKVERESKEFKLPKSLFYQIS 109


Top