BLASTX nr result

ID: Atractylodes22_contig00043856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043856
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vin...    87   1e-15
emb|CBI27448.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glyc...    75   7e-12
emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]    72   4e-11
ref|XP_002885267.1| uracil DNA glycosylase family protein [Arabi...    65   6e-09

>ref|XP_002271878.2| PREDICTED: uracil-DNA glycosylase [Vitis vinifera]
          Length = 328

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/110 (45%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
 Frame = +1

Query: 79  MASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPTTDALPSALPESIHDDH----SSPS 246
           MA+SK + D+  P+KR K   P ++SS  S  PK     + S       D H    SSPS
Sbjct: 1   MAASKTLMDYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPS 60

Query: 247 SNLSAEQKLRVQFNQSLAKAKRNLKICAERVSRSTSGKGLGFVKLEELLV 396
           S L+A QK R++FN+ LAK+KRNL IC+++VS+S   +G+GFV+LE+LL+
Sbjct: 61  SALTAHQKSRIEFNKFLAKSKRNLTICSQKVSKS-KAEGVGFVELEDLLL 109


>emb|CBI27448.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
 Frame = +1

Query: 103 DFFPPAKRSKRVAPAAASSFLSVPPKPTTDALPSALPESIHDDH----SSPSSNLSAEQK 270
           D+  P+KR K   P ++SS  S  PK     + S       D H    SSPSS L+A QK
Sbjct: 2   DYLQPSKRLKVSTPTSSSSSSSSSPKSLLLPVSSLSHSQSQDPHQSPPSSPSSALTAHQK 61

Query: 271 LRVQFNQSLAKAKRNLKICAERVSRSTSGKGLGFVKLEELLV 396
            R++FN+ LAK+KRNL IC+++VS+S   +G+GFV+LE+LL+
Sbjct: 62  SRIEFNKFLAKSKRNLTICSQKVSKS-KAEGVGFVELEDLLL 102


>ref|XP_003540731.1| PREDICTED: uracil-DNA glycosylase-like [Glycine max]
          Length = 303

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/105 (46%), Positives = 63/105 (60%)
 Frame = +1

Query: 82  ASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPTTDALPSALPESIHDDHSSPSSNLSA 261
           A S+ +TDFF PA  SKR+ P                     LP S   D ++ +S LS 
Sbjct: 4   APSRTLTDFFQPA--SKRLKPT--------------------LPASCKSDDAN-ASTLSV 40

Query: 262 EQKLRVQFNQSLAKAKRNLKICAERVSRSTSGKGLGFVKLEELLV 396
           +QKLR+++N+ LAK+KRNLK+C ERVS+S    GLG VKLEELLV
Sbjct: 41  DQKLRMEYNKLLAKSKRNLKLCVERVSKSKE-SGLGGVKLEELLV 84


>emb|CAN75314.1| hypothetical protein VITISV_028740 [Vitis vinifera]
          Length = 281

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
 Frame = +1

Query: 103 DFFPPAKRSKRVAPAAASSFLSVPPKPTTDALP-SALPESIHDDH-----SSPSSNLSAE 264
           D+  P+KR K   P  +SS  S    P +  LP S+L  S   D      SSPSS L+A 
Sbjct: 2   DYLQPSKRLKVSTPTTSSSSSS----PXSLLLPVSSLSHSQSQDPHQSPPSSPSSTLTAH 57

Query: 265 QKLRVQFNQSLAKAKRNLKICAERVSRSTSGKGLGFVKLEELLV 396
           QK R++FN+ LA +KRNL IC+++VS+S   +G+GFV+LE+LLV
Sbjct: 58  QKSRIEFNKFLAISKRNLTICSQKVSKS-KAEGVGFVELEDLLV 100


>ref|XP_002885267.1| uracil DNA glycosylase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331107|gb|EFH61526.1| uracil DNA
           glycosylase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
 Frame = +1

Query: 82  ASSKAITDFFPPAKRSKRVAPAAASSFLSVPPKPTTDALPSA--------LPESIHDDHS 237
           +SSK + DFF PAKR K  A  ++SSF +V     +  L SA        +  S+ DD  
Sbjct: 3   SSSKTLMDFFQPAKRLK--ASPSSSSFPAVSVAGGSRGLVSAANSPPRVTVTTSVADD-- 58

Query: 238 SPSSNLSAEQKLRVQFNQSLAKAKRNLKICAERVSRSTSGKGLGFVKLEELLV 396
             SS L+ EQ  R +FN+ +AK+KRNL +C+E+V+++ +  G  +V L ELLV
Sbjct: 59  --SSGLTPEQVARAEFNKFVAKSKRNLAVCSEKVTKAKAEGGC-YVPLSELLV 108


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