BLASTX nr result

ID: Atractylodes22_contig00043840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043840
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   163   1e-38
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   140   8e-32
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   138   4e-31
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   130   1e-28
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...   128   4e-28

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/151 (51%), Positives = 101/151 (66%)
 Frame = +2

Query: 2    QWLDGASLLDGFDSDPQLQKLVHDLTANPHSHPGFSLHNGKLYHKGKLVISTTSQWIPKL 181
            QW D   L +    D QLQK++ DL  +  S PG+ L  G L ++G+LV+S+ S  IP L
Sbjct: 806  QWKDEKLLREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMIPTL 865

Query: 182  LHEFXXXXXXXXXXFYRTYKRLASQVYWLGMTKSVKAFVQACDICQRYKASTLAPGGLLQ 361
            L EF          FYRTY+RLA+ VYW+GM  +V+ +V++CD CQR K    +PGGLLQ
Sbjct: 866  LAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQ 925

Query: 362  PLPIPSAIWEDISLDFITGLPKSKGFETVLV 454
            PLP+P  IWED+S+DFI GLPKSKG+E VLV
Sbjct: 926  PLPVPDRIWEDLSMDFIMGLPKSKGYEAVLV 956


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  140 bits (354), Expect = 8e-32
 Identities = 64/137 (46%), Positives = 91/137 (66%)
 Frame = +2

Query: 44   DPQLQKLVHDLTANPHSHPGFSLHNGKLYHKGKLVISTTSQWIPKLLHEFXXXXXXXXXX 223
            D +L+ +   L  +P S P +S+  G+L++KG+LV+  TS  +P +LH F          
Sbjct: 821  DDKLKDIFEQLLKDPDSIPRYSIKQGRLFYKGRLVLPKTSSLLPTILHTFHDLVVGGHSG 880

Query: 224  FYRTYKRLASQVYWLGMTKSVKAFVQACDICQRYKASTLAPGGLLQPLPIPSAIWEDISL 403
              RTYKR+A+++YW GM   +K +V  C +CQ+ K   L+P GLLQPLPIPS IWEDIS+
Sbjct: 881  QLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISM 940

Query: 404  DFITGLPKSKGFETVLV 454
            DFI GLP+S+ F++VLV
Sbjct: 941  DFIEGLPRSRTFDSVLV 957


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/137 (49%), Positives = 89/137 (64%)
 Frame = +2

Query: 44   DPQLQKLVHDLTANPHSHPGFSLHNGKLYHKGKLVISTTSQWIPKLLHEFXXXXXXXXXX 223
            D  LQ L+ ++TA      GF++ +G L + G+LVI         LL E+          
Sbjct: 1061 DADLQHLMAEVTAGRTPLQGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPMGGHSG 1120

Query: 224  FYRTYKRLASQVYWLGMTKSVKAFVQACDICQRYKASTLAPGGLLQPLPIPSAIWEDISL 403
             ++TYKRLA + YW GM K V  FVQ C ICQ++K STL+P GLLQPLPIP AIWEDIS+
Sbjct: 1121 IFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISM 1180

Query: 404  DFITGLPKSKGFETVLV 454
            DF+ GLPKS+G++T+LV
Sbjct: 1181 DFVEGLPKSQGWDTILV 1197


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/151 (40%), Positives = 93/151 (61%)
 Frame = +2

Query: 2    QWLDGASLLDGFDSDPQLQKLVHDLTANPHSHPGFSLHNGKLYHKGKLVISTTSQWIPKL 181
            QW   + L+     DP ++KL  ++ +      GF+   G L  KG+LV+        +L
Sbjct: 886  QW---SELMAAISQDPDIRKLREEVQSGKAPLAGFTEEQGVLKFKGRLVVPRKVAMTSRL 942

Query: 182  LHEFXXXXXXXXXXFYRTYKRLASQVYWLGMTKSVKAFVQACDICQRYKASTLAPGGLLQ 361
            +HE+           ++TY+RLA++ +W GM + V  F+Q C +CQ+ K S+LAP GLLQ
Sbjct: 943  IHEYHATPMGGHSGIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQ 1002

Query: 362  PLPIPSAIWEDISLDFITGLPKSKGFETVLV 454
            PLPIP+ IWED+S+DF+ GLPKS G++++LV
Sbjct: 1003 PLPIPTLIWEDVSMDFVEGLPKSGGWDSILV 1033


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/149 (40%), Positives = 90/149 (60%)
 Frame = +2

Query: 8   LDGASLLDGFDSDPQLQKLVHDLTANPHSHPGFSLHNGKLYHKGKLVISTTSQWIPKLLH 187
           LD   +++    D +LQ ++  L  NP     +   + KL +KG+LV+S TS  IP LLH
Sbjct: 254 LDVEMVMEEVKRDEELQGIIEVLKENPEGKANYQWVSDKLLYKGRLVLSKTSSLIPTLLH 313

Query: 188 EFXXXXXXXXXXFYRTYKRLASQVYWLGMTKSVKAFVQACDICQRYKASTLAPGGLLQPL 367
            F          F RTYK +  +++W+GM   VK +V+ C+ CQR K   L+  GLLQPL
Sbjct: 314 TFHNSVLGGHSGFLRTYKHMNGEIHWVGMKNDVKKYVEQCETCQRNKTKALSRAGLLQPL 373

Query: 368 PIPSAIWEDISLDFITGLPKSKGFETVLV 454
           P+P+ I ED ++DFI GLPK+ GF++++V
Sbjct: 374 PLPNLILEDWTMDFIEGLPKAGGFDSIMV 402



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/105 (43%), Positives = 63/105 (60%)
 Frame = +2

Query: 140  KLVISTTSQWIPKLLHEFXXXXXXXXXXFYRTYKRLASQVYWLGMTKSVKAFVQACDICQ 319
            ++V+S TS  IPK+LH F          F RTYKR++ ++YW GM   VK +V+ C+IC 
Sbjct: 718  RMVVSQTSTLIPKILHTFHDSILGGHSGFLRTYKRMSGELYWRGMKAEVKKYVEQCEICH 777

Query: 320  RYKASTLAPGGLLQPLPIPSAIWEDISLDFITGLPKSKGFETVLV 454
            R K     P G+LQP+PI   I ED + DFI GLP + G   ++V
Sbjct: 778  RNKYEATKPAGVLQPIPILDRILEDWT-DFIEGLPLAGGVNVIMV 821


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