BLASTX nr result

ID: Atractylodes22_contig00043809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043809
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...   117   1e-24
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   115   3e-24
ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              107   1e-21

>ref|XP_002326122.1| predicted protein [Populus trichocarpa] gi|222833315|gb|EEE71792.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/90 (70%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
 Frame = -2

Query: 391 ALSLAKHAKNLSSLDLSWCRNMTNEALGLIVDTCLSLKMLKLFGCTQITNVFIDGHSNEE 212
           ALSLA+ ++ L SLDLSWCRN+TNEALGLIVD+CLSLK+LKLFGC+Q+TNVF+DGHSN +
Sbjct: 166 ALSLARRSRKLLSLDLSWCRNLTNEALGLIVDSCLSLKVLKLFGCSQVTNVFLDGHSNSD 225

Query: 211 VKIKGLKGSQILKNIEVPDL--LPLRYSSV 128
           V+I GLK S +L++I VP+L    LRYSSV
Sbjct: 226 VQIIGLKTSPVLEHIRVPELQEFALRYSSV 255


>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/89 (60%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = -2

Query: 388 LSLAKHAKNLSSLDLSWCRNMTNEALGLIVDTCLSLKMLKLFGCTQITNVFIDGHSNEEV 209
           +SLA+HAKNL +LDLSWCRN+T+  LG IVD+C SL++LKLFGC+ +T+VF++GHSN E+
Sbjct: 582 ISLARHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEI 641

Query: 208 KIKGLKGSQILKNIEVPDLL--PLRYSSV 128
           +I GLK S +L+N++VP+    PLRYS V
Sbjct: 642 QILGLKMSPLLQNVKVPEPYQGPLRYSPV 670


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/89 (62%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = -2

Query: 388 LSLAKHAKNLSSLDLSWCRNMTNEALGLIVDTCLSLKMLKLFGCTQITNVFIDGHSNEEV 209
           LSLA HAKNL SLDLSWCRN+T+ ALGLIVD+CL+L+ LKLFGC+Q+T+ F++GHSN ++
Sbjct: 448 LSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRSLKLFGCSQVTDAFLNGHSNLQI 507

Query: 208 KIKGLKGSQILKNIEVPD--LLPLRYSSV 128
           +I GLK S +L++++VPD     L YSSV
Sbjct: 508 QIIGLKMSPVLEHVKVPDPHQGALNYSSV 536


>ref|XP_002309464.1| predicted protein [Populus trichocarpa] gi|222855440|gb|EEE92987.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/88 (61%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
 Frame = -2

Query: 391 ALSLAKHAKNLSSLDLSWCRNMTNEALGLIVDTCLSLKMLKLFGCTQITNVFIDGHSNEE 212
           ALS+AK ++NL SLDLSWCR +T+EALG+IVD+CLSLK+LKLFGCTQIT  F++GHSN  
Sbjct: 95  ALSIAKCSRNLVSLDLSWCRRLTDEALGMIVDSCLSLKLLKLFGCTQITEAFLNGHSNPM 154

Query: 211 VKIKGLKGSQILKNIEV--PDLLPLRYS 134
           V+I G K   +L++++   P   PLRYS
Sbjct: 155 VRIIGCKTGPVLEHLDALEPQENPLRYS 182


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/79 (62%), Positives = 67/79 (84%)
 Frame = -2

Query: 391 ALSLAKHAKNLSSLDLSWCRNMTNEALGLIVDTCLSLKMLKLFGCTQITNVFIDGHSNEE 212
           A+SLA+ ++ L  LDLSWCRN+T+  LG IVD+CLSL++LKLFGCTQITN+F+DGHSN +
Sbjct: 748 AISLARRSRELIRLDLSWCRNLTDGDLGFIVDSCLSLRVLKLFGCTQITNMFVDGHSNPQ 807

Query: 211 VKIKGLKGSQILKNIEVPD 155
           V+I GLK + ILK++++ D
Sbjct: 808 VEIIGLKLTPILKHLKLTD 826


Top