BLASTX nr result

ID: Atractylodes22_contig00043800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043800
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...    65   4e-09
emb|CBI27082.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002524388.1| ATP binding protein, putative [Ricinus commu...    61   8e-08
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]    60   1e-07
ref|XP_004162037.1| PREDICTED: putative nuclear matrix constitue...    59   5e-07

>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like [Vitis vinifera]
          Length = 1213

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 MFTPDQRIRRSTLTITPRTDGQKIGNNTRHV---SGKGKAVAFMDXXXXXXXXXLDEKGV 83
           MFTP QR   + L++TPR++ QK G          GKGK+VAF+D            K +
Sbjct: 1   MFTP-QRKAWTGLSLTPRSEAQKSGGGAVSNPVNGGKGKSVAFVDGPPPPLGSLSG-KAM 58

Query: 82  KAAAEGGDLDDWRRFRDAGLLDEATME 2
               +GGD++DWRR R+AGLLDEA ME
Sbjct: 59  LTGIDGGDMEDWRRLREAGLLDEAAME 85


>emb|CBI27082.3| unnamed protein product [Vitis vinifera]
          Length = 1122

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 MFTPDQRIRRSTLTITPRTDGQKIGNNTRHV---SGKGKAVAFMDXXXXXXXXXLDEKGV 83
           MFTP QR   + L++TPR++ QK G          GKGK+VAF+D            K +
Sbjct: 1   MFTP-QRKAWTGLSLTPRSEAQKSGGGAVSNPVNGGKGKSVAFVDGPPPPLGSLSG-KAM 58

Query: 82  KAAAEGGDLDDWRRFRDAGLLDEATME 2
               +GGD++DWRR R+AGLLDEA ME
Sbjct: 59  LTGIDGGDMEDWRRLREAGLLDEAAME 85


>ref|XP_002524388.1| ATP binding protein, putative [Ricinus communis]
           gi|223536349|gb|EEF37999.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1172

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
 Frame = -2

Query: 253 MFTPDQRIRRSTLTITPRTDGQKIGNNTRHVSGKGKAVAFMDXXXXXXXXXLDEKGV--- 83
           MFTP +R   +  T+TPR++ +K G  T +V GKGKA+ F+D                  
Sbjct: 1   MFTPQRRSSPAITTLTPRSEVRKSGA-TGNV-GKGKAMTFIDGPTLLPPPPPPPVASLSG 58

Query: 82  KAAAEGGDLDDWRRFRDAGLLDEATME 2
            A AE  D++DWRRF++AGLLDEA ME
Sbjct: 59  NAEAETEDMEDWRRFKEAGLLDEAVME 85


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = -2

Query: 217 LTITPRTDGQKIGNNTRHV---SGKGKAVAFMDXXXXXXXXXLDEKGVKAAAEGGDLDDW 47
           L++TPR++ QK G          GKGK+VAF+D            K +    +GGD++DW
Sbjct: 30  LSLTPRSEAQKSGGGAVSNPVNGGKGKSVAFVDGPPPPLGSLSG-KAMLTGIDGGDMEDW 88

Query: 46  RRFRDAGLLDEATME 2
           RR R+AGLLDEA ME
Sbjct: 89  RRLREAGLLDEAAME 103


>ref|XP_004162037.1| PREDICTED: putative nuclear matrix constituent protein 1-like
           protein-like, partial [Cucumis sativus]
          Length = 373

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 MFTPDQRIRRSTLTITPRTDGQKIGNNTRHVSGKGKAVAFMDXXXXXXXXXLDEKGVKAA 74
           MFTP QR      ++TPRT+  K+      + GKGK V F D          DE    A 
Sbjct: 1   MFTP-QRTGWPAASLTPRTE-PKLALTNSIILGKGKDVTFTDDPPPPLGSLNDELYKTAT 58

Query: 73  A-EGGDLDDWRRFRDAGLLDEATME 2
           A + GD+DDWR+F+ AGLLD A ME
Sbjct: 59  AVDTGDMDDWRKFKKAGLLDAAAME 83


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