BLASTX nr result

ID: Atractylodes22_contig00043771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043771
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   271   5e-71
ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|2...   270   2e-70
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   262   2e-68
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...   241   4e-62

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score =  271 bits (693), Expect = 5e-71
 Identities = 126/187 (67%), Positives = 155/187 (82%)
 Frame = +3

Query: 3   LITGYGKVSNMEAAERILQSLVSAGLKPDESTYRTMIEGWGRVQNFKEAERYYKEMNRFD 182
           LITGYGK SNM+AA+ I ++L + GL+PDESTYR+MIEGWGR +N+KEAE YY E+ R  
Sbjct: 353 LITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLG 412

Query: 183 FKPNSSNLYTMINLQAKHGDEAGAMRTINDMMTMGCQFSSILSIVLQAYEKVERFDKVPS 362
           FKPNSSNLYTMINLQAK+ D   A RT++DM  +GCQ+SS+L  +LQAYE+  R D+VP 
Sbjct: 413 FKPNSSNLYTMINLQAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPL 472

Query: 363 VVKGLLYNHVLNNQTSCSILVMAYVKHCLVDDAIEVLGLKKWKDKVFEDSLYHLIICTCK 542
           ++KG  Y +VL NQTSCSILVMAYVKHCLVDDAI+VL  K+WKD +FED+LYHL+IC+CK
Sbjct: 473 ILKGSFYEYVLVNQTSCSILVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCK 532

Query: 543 ELGYLDN 563
           ELG L+N
Sbjct: 533 ELGRLEN 539


>ref|XP_002307852.1| predicted protein [Populus trichocarpa] gi|222853828|gb|EEE91375.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  270 bits (689), Expect = 2e-70
 Identities = 125/187 (66%), Positives = 157/187 (83%)
 Frame = +3

Query: 3   LITGYGKVSNMEAAERILQSLVSAGLKPDESTYRTMIEGWGRVQNFKEAERYYKEMNRFD 182
           LITGYGK SNM AA+R+   + +AGL+PD++TYR+MIEGWGRV N+KEAE YYKE+ R  
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 180

Query: 183 FKPNSSNLYTMINLQAKHGDEAGAMRTINDMMTMGCQFSSILSIVLQAYEKVERFDKVPS 362
           FKPNS NLYT+INLQA+HGDE GA RT++DM+ +GCQ+SSIL  +L+AYEKV R DK+P 
Sbjct: 181 FKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKAYEKVGRIDKIPF 240

Query: 363 VVKGLLYNHVLNNQTSCSILVMAYVKHCLVDDAIEVLGLKKWKDKVFEDSLYHLIICTCK 542
           ++KG  Y HV  NQ SCSILV+AYVK+ LVD+AI++LG KKW D VFED+LYHL+IC+CK
Sbjct: 241 LLKGSFYQHVTVNQNSCSILVIAYVKNLLVDEAIKLLGDKKWNDPVFEDNLYHLLICSCK 300

Query: 543 ELGYLDN 563
           ELG+LD+
Sbjct: 301 ELGHLDS 307


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  262 bits (670), Expect = 2e-68
 Identities = 122/187 (65%), Positives = 155/187 (82%)
 Frame = +3

Query: 3   LITGYGKVSNMEAAERILQSLVSAGLKPDESTYRTMIEGWGRVQNFKEAERYYKEMNRFD 182
           LITGYGK+SNM AA+R+   + +AGL+PDE+TYR+MIEGWGR  N+KEAE YYKE+ R  
Sbjct: 406 LITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLG 465

Query: 183 FKPNSSNLYTMINLQAKHGDEAGAMRTINDMMTMGCQFSSILSIVLQAYEKVERFDKVPS 362
           + PNSSNLYT+INLQAKH D+ GA+ T++DM+ +GCQ SSIL  +L+AYEK  R +KVP 
Sbjct: 466 YMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPL 525

Query: 363 VVKGLLYNHVLNNQTSCSILVMAYVKHCLVDDAIEVLGLKKWKDKVFEDSLYHLIICTCK 542
           ++K   Y HVL NQTSCSILVM YVK+CLVD+A++VLG KKWKD+ FED+LYHL+IC+CK
Sbjct: 526 LLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDNLYHLLICSCK 585

Query: 543 ELGYLDN 563
           ELG L++
Sbjct: 586 ELGNLES 592


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  253 bits (646), Expect = 1e-65
 Identities = 117/187 (62%), Positives = 152/187 (81%)
 Frame = +3

Query: 3   LITGYGKVSNMEAAERILQSLVSAGLKPDESTYRTMIEGWGRVQNFKEAERYYKEMNRFD 182
           LITGYGK SNM+ A+R+   + ++G++PDE+TYR+MIEGWGR  N+K AE YYKE+ R  
Sbjct: 345 LITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRG 404

Query: 183 FKPNSSNLYTMINLQAKHGDEAGAMRTINDMMTMGCQFSSILSIVLQAYEKVERFDKVPS 362
           + PNSSNL+T+INLQAKH DEAG ++T+NDM+ +GC+ SSI+  VLQAYEK  R   VP 
Sbjct: 405 YMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPV 464

Query: 363 VVKGLLYNHVLNNQTSCSILVMAYVKHCLVDDAIEVLGLKKWKDKVFEDSLYHLIICTCK 542
           ++ G  Y  VL++QTSCSILVMAYVKHCLVDDA++VL  K+WKD  FE++LYHL+IC+CK
Sbjct: 465 LLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCK 524

Query: 543 ELGYLDN 563
           ELG+L+N
Sbjct: 525 ELGHLEN 531


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315195|gb|EFH45618.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 906

 Score =  241 bits (616), Expect = 4e-62
 Identities = 112/185 (60%), Positives = 144/185 (77%)
 Frame = +3

Query: 3   LITGYGKVSNMEAAERILQSLVSAGLKPDESTYRTMIEGWGRVQNFKEAERYYKEMNRFD 182
           LITGYGKVS MEAA+ +   L   GL+PDE++YR+MIEGWGR  N++EA  YY+E+ R  
Sbjct: 357 LITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRCG 416

Query: 183 FKPNSSNLYTMINLQAKHGDEAGAMRTINDMMTMGCQFSSILSIVLQAYEKVERFDKVPS 362
           +KPNSSNL+T+INLQAK+GD  GA++TI DM ++GCQ+ SIL I+LQAYEKV + D VP 
Sbjct: 417 YKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSILGIILQAYEKVGKIDVVPY 476

Query: 363 VVKGLLYNHVLNNQTSCSILVMAYVKHCLVDDAIEVLGLKKWKDKVFEDSLYHLIICTCK 542
           ++KG  +NH+  NQTS SILVMAY+KH +VDD + +L  KKW+D  FE  LYHL+IC+CK
Sbjct: 477 LLKGSFHNHIRLNQTSFSILVMAYIKHGMVDDCLALLREKKWRDSAFESHLYHLLICSCK 536

Query: 543 ELGYL 557
           E G L
Sbjct: 537 ESGQL 541


Top