BLASTX nr result

ID: Atractylodes22_contig00043741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043741
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193702.1| RING/U-box domain-containing protein [Arabidops...   106   2e-21
dbj|BAF00722.1| hypothetical protein [Arabidopsis thaliana]           104   6e-21
ref|XP_002867925.1| zinc finger family protein [Arabidopsis lyra...   103   1e-20
ref|XP_003547311.1| PREDICTED: uncharacterized protein LOC100783...    98   6e-19
ref|XP_002322352.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|NP_193702.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|145333436|ref|NP_001078409.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
           gi|3250676|emb|CAA19684.1| putative protein [Arabidopsis
           thaliana] gi|7268763|emb|CAB78969.1| putative protein
           [Arabidopsis thaliana] gi|332658812|gb|AEE84212.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana] gi|332658813|gb|AEE84213.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 532

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
 Frame = -2

Query: 456 QERSQLALIQRFLAGG-FSLGDHHTNTYESPLPPCSCAEDDNSSYLDNTIKDLHQLPWLE 280
           QERSQLALIQRFLAGG FSL DHHT TY+SP PPC+      SSY++  +KDLHQLPWLE
Sbjct: 462 QERSQLALIQRFLAGGGFSLSDHHT-TYQSPPPPCT-----ESSYVEAAMKDLHQLPWLE 515

Query: 279 RFVSVISDNYYDEY 238
           RFVSVISD+YY+EY
Sbjct: 516 RFVSVISDDYYEEY 529


>dbj|BAF00722.1| hypothetical protein [Arabidopsis thaliana]
          Length = 532

 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/73 (73%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = -2

Query: 453 ERSQLALIQRFLAGG-FSLGDHHTNTYESPLPPCSCAEDDNSSYLDNTIKDLHQLPWLER 277
           ERSQLALIQRFLAGG FSL DHHT TY+SP PPC+      SSY++  +KDLHQLPWLER
Sbjct: 463 ERSQLALIQRFLAGGGFSLSDHHT-TYQSPPPPCT-----ESSYVEAAMKDLHQLPWLER 516

Query: 276 FVSVISDNYYDEY 238
           FVSVISD+YY+EY
Sbjct: 517 FVSVISDDYYEEY 529


>ref|XP_002867925.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313761|gb|EFH44184.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/74 (72%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = -2

Query: 456 QERSQLALIQRFLAGG-FSLGDHHTNTYESPLPPCSCAEDDNSSYLDNTIKDLHQLPWLE 280
           QERSQLALIQRFLAGG FSL DHHT+ Y+SP PPC+      SSY+   +KDLHQLPWLE
Sbjct: 462 QERSQLALIQRFLAGGGFSLSDHHTS-YQSPPPPCT-----ESSYVAAAMKDLHQLPWLE 515

Query: 279 RFVSVISDNYYDEY 238
           RFVSVISD+YY+EY
Sbjct: 516 RFVSVISDDYYEEY 529


>ref|XP_003547311.1| PREDICTED: uncharacterized protein LOC100783040 [Glycine max]
          Length = 514

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/75 (72%), Positives = 59/75 (78%)
 Frame = -2

Query: 456 QERSQLALIQRFLAGGFSLGDHHTNTYESPLPPCSCAEDDNSSYLDNTIKDLHQLPWLER 277
           QERSQLALIQRFLAGGFSL DH  N Y+SP P C+       SY+D  +KDLHQLPWLER
Sbjct: 450 QERSQLALIQRFLAGGFSLSDH--NPYQSP-PRCT------DSYVD-PMKDLHQLPWLER 499

Query: 276 FVSVISDNYYDEYTQ 232
           FVSVISDNYYD+Y Q
Sbjct: 500 FVSVISDNYYDDYIQ 514


>ref|XP_002322352.1| predicted protein [Populus trichocarpa] gi|222869348|gb|EEF06479.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 53/75 (70%), Positives = 59/75 (78%)
 Frame = -2

Query: 456 QERSQLALIQRFLAGGFSLGDHHTNTYESPLPPCSCAEDDNSSYLDNTIKDLHQLPWLER 277
           QERSQLALIQRFLAGGFSL DHH   Y+SP P C+       SY+D  +KDLHQLPWLER
Sbjct: 457 QERSQLALIQRFLAGGFSLSDHHP--YQSP-PSCT------DSYVD-AMKDLHQLPWLER 506

Query: 276 FVSVISDNYYDEYTQ 232
           FVSVISDNYY++Y Q
Sbjct: 507 FVSVISDNYYEDYIQ 521


Top