BLASTX nr result

ID: Atractylodes22_contig00043690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043690
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    79   3e-13
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    56   3e-06
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    55   8e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 16/137 (11%)
 Frame = -1

Query: 363 DELTAISSRLEGRITKTQEDHESLIALMKRDQIRLQAEVQSSFEELRGRGPRDGRLKQ-- 190
           ++L   + RLEGRI +T+E+ E ++ + + DQ + Q EV S+  +L+    ++G  K+  
Sbjct: 60  EDLDVANFRLEGRIERTRENLEGMLTVARADQNKFQTEVSSALAKLQPEKEKNGNRKEVS 119

Query: 189 ------KMNGQEG-------DEWFHNXXXXXXXXXXXXFHAGTGG-SSQGGNWRFRKLDM 52
                 ++ G+EG       D    N              A + G S  GGNWR +KLDM
Sbjct: 120 PHTVDLELEGREGLRGERAMDRRGENEVFDGGGIGGGRGEAWSRGHSGPGGNWRHKKLDM 179

Query: 51  PIFEGANPDGWILRAER 1
           P F+  +PDGWILR ER
Sbjct: 180 PAFDDTDPDGWILRGER 196


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 99  GGSSQGGNWRFRKLDMPIFEGANPDGWILRAER 1
           GG   GG+WR +KLD+P+F G NPDGWI+RAER
Sbjct: 89  GGFRGGGSWRAKKLDLPVFSGNNPDGWIIRAER 121


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
 Frame = -1

Query: 354 TAISSRLEGRITKTQEDHESLIALMKRD-QIRLQAEVQSSFEELRGRGPRDGRLKQKMNG 178
           T I+  LE    K  ED   L   +    + R +A  + S +E R    R+G ++   +G
Sbjct: 7   TQIADSLEKTTKKIGEDMAKLAERIDSSAESRREASERGSPDERRDWEEREGFVRGDGDG 66

Query: 177 QEGDEWFHNXXXXXXXXXXXXFHAGTGGSSQGGNWRFRKLDMPIFEGANPDGWILRAER 1
            EG                        G   GG W+ ++LD+PIF G NPDGWILR ER
Sbjct: 67  YEG------------------------GFRGGGGWKAKRLDLPIFTGTNPDGWILRTER 101


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