BLASTX nr result

ID: Atractylodes22_contig00043669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043669
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]   130   1e-28
ref|XP_002521673.1| pentatricopeptide repeat-containing protein,...   118   4e-25
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....   112   4e-23

>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = -2

Query: 264 LDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVLNNLSKAKNFDG 85
           L HKDWLSP EV++IFE LKDPNSI++V NQ SKRKDYKPNEALYT V+N L++AKNFD 
Sbjct: 2   LTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDA 61

Query: 84  IEEVMKRIKLEKGCRLSDGFFYNVIRIY 1
           IE++M++IKL+K CRLS+ FF+NVI+IY
Sbjct: 62  IEDIMQKIKLDKSCRLSNDFFHNVIKIY 89


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/116 (54%), Positives = 86/116 (74%)
 Frame = -2

Query: 348 IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 169
           I+P  IQ S + S         PD    LDHKDWLSP EV++IF+ L++P S++ VL+ +
Sbjct: 22  IHPTLIQKSTFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75

Query: 168 SKRKDYKPNEALYTSVLNNLSKAKNFDGIEEVMKRIKLEKGCRLSDGFFYNVIRIY 1
           SKRKD+KPNEALYT V+N L++A+ FD IE+V+K +K++K CRLSD FFYNVI++Y
Sbjct: 76  SKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVY 131


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = -2

Query: 348 IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 169
           I+P  IQ S + S         PD    LDHKDWLSP EV++IF+ L++P S++ VL+ +
Sbjct: 22  IHPTLIQKSIFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75

Query: 168 SKRKDYKPNEALYTSVLNNLSKAKNFDGIEEVMKRIKLEKGCRLSDGFFYNVIRIY 1
            KRKD+KPNEALYT V+N L++A+ FD IE+V+K +K++K CRLSD FFYNVI++Y
Sbjct: 76  CKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVFFYNVIKVY 131


>ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539064|gb|EEF40660.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/76 (69%), Positives = 68/76 (89%)
 Frame = -2

Query: 228 VRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVLNNLSKAKNFDGIEEVMKRIKLEK 49
           +RIFE++KDPNS+ +V +Q + RKDYKPNEALYT V+N L++AKNFD IE++M+RIKLEK
Sbjct: 1   MRIFESIKDPNSVFSVWDQYTNRKDYKPNEALYTLVINKLAQAKNFDAIEDIMQRIKLEK 60

Query: 48  GCRLSDGFFYNVIRIY 1
            CRLS+GFFYNVI+IY
Sbjct: 61  SCRLSNGFFYNVIKIY 76


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/93 (54%), Positives = 66/93 (70%)
 Frame = -2

Query: 279 DPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVLNNLSKA 100
           D    L HKDWL+P EV++IFE +KDP+ ++      SKRKDY+P E+LY  ++N   +A
Sbjct: 49  DKLARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQA 108

Query: 99  KNFDGIEEVMKRIKLEKGCRLSDGFFYNVIRIY 1
           K FD IEEVM  IKLEK CR S+ FFYN++RIY
Sbjct: 109 KMFDEIEEVMSTIKLEKRCRFSEDFFYNLMRIY 141