BLASTX nr result

ID: Atractylodes22_contig00043660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043660
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]              117   1e-24
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]   115   3e-24
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul...   108   4e-22
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          108   4e-22
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t...   107   1e-21

>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
          Length = 353

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/78 (69%), Positives = 66/78 (84%)
 Frame = +3

Query: 3   GIEQDCVDLGCDSQSAIHLAKNQVHHARTKHINVRYHFVRDVIEEGDIFFMKVHTDENPA 182
           GI Q+ VD+ CDSQSAI LAKNQVHH+RTKHI+VR+HFVR++++EGDI   K+ T +NPA
Sbjct: 21  GIVQEHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPA 80

Query: 183 DMLTKVVTRSKFQHCLDL 236
           DMLTK V+  KFQHCLDL
Sbjct: 81  DMLTKCVSGIKFQHCLDL 98


>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
          Length = 215

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/84 (61%), Positives = 69/84 (82%)
 Frame = +3

Query: 3   GIEQDCVDLGCDSQSAIHLAKNQVHHARTKHINVRYHFVRDVIEEGDIFFMKVHTDENPA 182
           GI+Q  V L CDSQSAI+LAKNQV+HARTKHI+VR+H +++++  G++   KVHT EN A
Sbjct: 132 GIQQGGVQLYCDSQSAIYLAKNQVYHARTKHIDVRFHKIKELVSSGELLLEKVHTSENAA 191

Query: 183 DMLTKVVTRSKFQHCLDLLHISKC 254
           DMLTK VT  KF+HCL+L+++SKC
Sbjct: 192 DMLTKPVTIEKFKHCLNLINVSKC 215


>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
           gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
           [Medicago truncatula]
          Length = 803

 Score =  108 bits (271), Expect = 4e-22
 Identities = 49/79 (62%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   GIEQDCVDLGCDSQSAIHLAKNQVHHARTKHINVRYHFVRDVIEEGDIFFMKVHTDENPA 182
           GI Q+CV + CDSQSAIHLA +QV+H RTKHI++R HFVRD+IE  +I   KV ++ENPA
Sbjct: 76  GITQECVKIHCDSQSAIHLANHQVYHERTKHIDIRLHFVRDMIESKEIVVEKVASEENPA 135

Query: 183 DMLTKVVTRSKFQHCLDLL 239
           D+ TK + RS+F+HCLDL+
Sbjct: 136 DVFTKSLPRSRFKHCLDLI 154


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  108 bits (271), Expect = 4e-22
 Identities = 48/81 (59%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   GIEQDCVDLGCDSQSAIHLAKNQVHHARTKHINVRYHFVRDVIEEGDIFFMKVHTDENPA 182
           G+ Q+ + + CD+QSAI LAKNQ +HARTKHI+V+YH+VR++IE GD+   K+ T +NP+
Sbjct: 213 GVIQENIAVFCDNQSAIFLAKNQTYHARTKHIDVKYHYVREIIEGGDVLLKKIDTKDNPS 272

Query: 183 DMLTKVVTRSKFQHCLDLLHI 245
           DMLTKVV+  KFQHCL L+ I
Sbjct: 273 DMLTKVVSEVKFQHCLKLIQI 293


>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
           retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
           reverse transcriptase [Arabidopsis thaliana]
          Length = 587

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/83 (60%), Positives = 63/83 (75%)
 Frame = +3

Query: 3   GIEQDCVDLGCDSQSAIHLAKNQVHHARTKHINVRYHFVRDVIEEGDIFFMKVHTDENPA 182
           G+EQD V L CDSQSAI L+KN  HH RTKHI+VRY+F+RDV+E GD+  +K+HT  NPA
Sbjct: 503 GLEQDKVTLWCDSQSAICLSKNSTHHERTKHIDVRYNFIRDVVEAGDVDVLKIHTSRNPA 562

Query: 183 DMLTKVVTRSKFQHCLDLLHISK 251
           D LTK +  +KFQ  L+LL + K
Sbjct: 563 DALTKSIPVNKFQSALELLKLVK 585


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