BLASTX nr result

ID: Atractylodes22_contig00043653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043653
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, puta...   134   6e-30
ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera] gi|2...   130   9e-29
ref|XP_002876566.1| CYCP3_2 [Arabidopsis lyrata subsp. lyrata] g...   127   1e-27

>ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|222861482|gb|EEE99024.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/87 (75%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   SPRKLRYDVYSYSYQHDSKTPLVISVLASLIERTLARNERIGRKCGLSIKNRSSKTRVFD 182
           SPRKLR D+YSYSYQ+DS TPLVI+VLASLIERT+ARNERI + C  ++ ++ ++TRVFD
Sbjct: 9   SPRKLRSDLYSYSYQNDSNTPLVIAVLASLIERTMARNERIVKNCTWAL-SKDTRTRVFD 67

Query: 183 CNETPDMTIQSYLERIFRYTRAGPSVY 263
           C+ETPD+TIQSYLERIFRYTRAGPSVY
Sbjct: 68  CHETPDLTIQSYLERIFRYTRAGPSVY 94


>ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|222842988|gb|EEE80535.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/87 (75%), Positives = 78/87 (89%)
 Frame = +3

Query: 3   SPRKLRYDVYSYSYQHDSKTPLVISVLASLIERTLARNERIGRKCGLSIKNRSSKTRVFD 182
           SPRKLR D+YSYSYQ+DS TPLVISVLASLIERT+ARNERI + C  ++ ++  +TRVFD
Sbjct: 9   SPRKLRSDLYSYSYQNDSNTPLVISVLASLIERTMARNERIVKNCTWAL-SKDIRTRVFD 67

Query: 183 CNETPDMTIQSYLERIFRYTRAGPSVY 263
           C+ETPD+TIQSYLER+FRYTRAGPSVY
Sbjct: 68  CHETPDLTIQSYLERVFRYTRAGPSVY 94


>ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
           gi|223548828|gb|EEF50317.1| Nuc-1 negative regulatory
           protein preg, putative [Ricinus communis]
          Length = 224

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/87 (77%), Positives = 75/87 (86%)
 Frame = +3

Query: 3   SPRKLRYDVYSYSYQHDSKTPLVISVLASLIERTLARNERIGRKCGLSIKNRSSKTRVFD 182
           SPRKLR D+YSYSYQ+DS  PLVISVLASLIERT+ARNERI + C  ++ ++  KTRVFD
Sbjct: 9   SPRKLRSDLYSYSYQNDSSIPLVISVLASLIERTMARNERIAKNCSWAL-SKDIKTRVFD 67

Query: 183 CNETPDMTIQSYLERIFRYTRAGPSVY 263
           C ETPDMTIQSYLERIFRYTR GPSVY
Sbjct: 68  CYETPDMTIQSYLERIFRYTRTGPSVY 94


>ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera]
           gi|297734540|emb|CBI16591.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  130 bits (328), Expect = 9e-29
 Identities = 67/87 (77%), Positives = 74/87 (85%)
 Frame = +3

Query: 3   SPRKLRYDVYSYSYQHDSKTPLVISVLASLIERTLARNERIGRKCGLSIKNRSSKTRVFD 182
           SPRKLR D+YSYSYQ DS TPLVISVLASLIERT+ARNERI +     + +R  +T VFD
Sbjct: 15  SPRKLRTDLYSYSYQEDSNTPLVISVLASLIERTMARNERIAKNSPRGL-SRYLRTGVFD 73

Query: 183 CNETPDMTIQSYLERIFRYTRAGPSVY 263
           C+ETPDMTIQSYLERIFRYTRAGPSVY
Sbjct: 74  CHETPDMTIQSYLERIFRYTRAGPSVY 100


>ref|XP_002876566.1| CYCP3_2 [Arabidopsis lyrata subsp. lyrata]
           gi|297322404|gb|EFH52825.1| CYCP3_2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 227

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/87 (72%), Positives = 73/87 (83%)
 Frame = +3

Query: 3   SPRKLRYDVYSYSYQHDSKTPLVISVLASLIERTLARNERIGRKCGLSIKNRSSKTRVFD 182
           SPRKLR D+YSYSYQ++S+TPLVISVL+SLI+RTL RNERI R+  L       KT++FD
Sbjct: 10  SPRKLRSDLYSYSYQNNSETPLVISVLSSLIDRTLTRNERISRR-ALPSSGAGGKTQIFD 68

Query: 183 CNETPDMTIQSYLERIFRYTRAGPSVY 263
           C E PDMTIQSYLERIFRYT+AGPSVY
Sbjct: 69  CREIPDMTIQSYLERIFRYTKAGPSVY 95


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