BLASTX nr result

ID: Atractylodes22_contig00043640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043640
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   241   3e-62
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...   237   8e-61
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   208   3e-52
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   208   4e-52
gb|ABB47037.1| retrotransposon protein, putative, unclassified, ...   204   6e-51

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  241 bits (616), Expect = 3e-62
 Identities = 116/170 (68%), Positives = 135/170 (79%)
 Frame = -3

Query: 515  GFLGLTGYYRKFISGYGKVAKPLTELTKKDGFHWGPTAQSAFEELKKLMITAPVLPLPDF 336
            GFLGLT YYRKFI  YGK+AKPLTELTKKD F W    Q AF++LK+ + T+PVL LPDF
Sbjct: 614  GFLGLTDYYRKFIKDYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKRRLTTSPVLALPDF 673

Query: 335  SQPFEIECDASGRGIGVVLMQGRKPIAYFSKALSDRNLNMSAYENEIMALVLAIQH*RPY 156
            ++ F IECDASG GIG +LMQ RKP+AY+SKAL  RNL  SAYE E+MA+VLAIQH RPY
Sbjct: 674  NKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKSAYEKELMAVVLAIQHWRPY 733

Query: 155  LLGRDFTVFSDQKSLRHLLDQRITTTDQQNWIAKLMGYNFAICYKPGKEN 6
            LLGR F V +DQKSL+ LL QR+ T +QQNW AKL+GY+F I YKPGK N
Sbjct: 734  LLGRRFVVSTDQKSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLN 783


>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score =  237 bits (604), Expect = 8e-61
 Identities = 118/170 (69%), Positives = 132/170 (77%)
 Frame = -3

Query: 515 GFLGLTGYYRKFISGYGKVAKPLTELTKKDGFHWGPTAQSAFEELKKLMITAPVLPLPDF 336
           GFLGLT YYRKFI  YGK+AKPLTELTKK+GF WG   Q AFE LK  + TAPVL LPDF
Sbjct: 99  GFLGLTSYYRKFIKDYGKLAKPLTELTKKEGFMWGAQEQVAFEVLKHRVTTAPVLALPDF 158

Query: 335 SQPFEIECDASGRGIGVVLMQGRKPIAYFSKALSDRNLNMSAYENEIMALVLAIQH*RPY 156
           S+ F IE DASG G+G +L+Q  + IAYFSKAL DRNL  SAYE E+MA+ L+IQH RPY
Sbjct: 159 SKEFYIESDASGNGLGAILLQNGRLIAYFSKALGDRNLTKSAYEKELMAVALSIQHWRPY 218

Query: 155 LLGRDFTVFSDQKSLRHLLDQRITTTDQQNWIAKLMGYNFAICYKPGKEN 6
           L+GR FTV +DQKSLR LL Q+ITT DQQNW AKL GY F I YKPG EN
Sbjct: 219 LMGRKFTVCTDQKSLRQLLQQQITTMDQQNWAAKLFGYQFDILYKPGLEN 268


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/170 (60%), Positives = 129/170 (75%)
 Frame = -3

Query: 515  GFLGLTGYYRKFISGYGKVAKPLTELTKKDGFHWGPTAQSAFEELKKLMITAPVLPLPDF 336
            GFLGLTGYYR+F+  YGK+AKPLT+L KKD FHW   +  AF  LK+ MITAPVL LP+F
Sbjct: 751  GFLGLTGYYRRFVKDYGKIAKPLTDLLKKDAFHWTEGSNQAFMALKQAMITAPVLXLPNF 810

Query: 335  SQPFEIECDASGRGIGVVLMQGRKPIAYFSKALSDRNLNMSAYENEIMALVLAIQH*RPY 156
            S+ F IE DASG+GIGVVLMQ   PIAY SKALSDR   +S YE E++A+++AI+    Y
Sbjct: 811  SKEFIIETDASGQGIGVVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWESY 870

Query: 155  LLGRDFTVFSDQKSLRHLLDQRITTTDQQNWIAKLMGYNFAICYKPGKEN 6
            L+ R F + +D +SL++LL+QR+TT  QQ W+AKLM Y++ I YK GKEN
Sbjct: 871  LVDRHFVIKTDHQSLKYLLEQRVTTPTQQAWVAKLMQYDYEIRYKQGKEN 920


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  208 bits (529), Expect = 4e-52
 Identities = 99/170 (58%), Positives = 126/170 (74%)
 Frame = -3

Query: 515  GFLGLTGYYRKFISGYGKVAKPLTELTKKDGFHWGPTAQSAFEELKKLMITAPVLPLPDF 336
            GFLGLTGYYRKF+  YG +A PLT+L KK GF+W   ++ AF+ L++ M+T PVL LPDF
Sbjct: 1770 GFLGLTGYYRKFVQHYGSMAAPLTQLVKKGGFNWTDDSEEAFQRLQQAMMTLPVLALPDF 1829

Query: 335  SQPFEIECDASGRGIGVVLMQGRKPIAYFSKALSDRNLNMSAYENEIMALVLAIQH*RPY 156
            S  FE+E DASG GIG VLMQ +KPIAYFS  L+ R+     YE E+MA+V+A+Q  RPY
Sbjct: 1830 SSTFELETDASGYGIGAVLMQAKKPIAYFSHTLAVRDRVKPVYERELMAVVMAVQRWRPY 1889

Query: 155  LLGRDFTVFSDQKSLRHLLDQRITTTDQQNWIAKLMGYNFAICYKPGKEN 6
            LLG+ F V +DQKSL+ LL+QR+     Q W+AKL+GY+F + YKPG EN
Sbjct: 1890 LLGKPFIVRTDQKSLKFLLEQRVIQPQYQKWVAKLLGYSFEVQYKPGLEN 1939


>gb|ABB47037.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1347

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/171 (54%), Positives = 125/171 (73%)
 Frame = -3

Query: 515  GFLGLTGYYRKFISGYGKVAKPLTELTKKDGFHWGPTAQSAFEELKKLMITAPVLPLPDF 336
            GFLGL  YYRKFI  +G VA PLT+L +KD F W P    AF+ LK  + T PVL LPDF
Sbjct: 648  GFLGLASYYRKFIQDFGSVAAPLTQLLRKDSFAWAPATDDAFQRLKLALTTTPVLSLPDF 707

Query: 335  SQPFEIECDASGRGIGVVLMQGRKPIAYFSKALSDRNLNMSAYENEIMALVLAIQH*RPY 156
            ++PF +ECDASG G G VL QG  PIAYFS+ ++ R+  ++AYE E+++LV A++H RPY
Sbjct: 708  NRPFVVECDASGTGFGAVLHQGEDPIAYFSRPIATRHHALAAYERELISLVQAVRHWRPY 767

Query: 155  LLGRDFTVFSDQKSLRHLLDQRITTTDQQNWIAKLMGYNFAICYKPGKENS 3
            L GR F V +D  SL+ LLDQR++T  Q +W++KL+G++F + YKPGK+N+
Sbjct: 768  LWGRQFIVKTDHYSLKFLLDQRLSTIPQHHWVSKLLGFDFVVEYKPGKQNA 818


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