BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043628
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    64   1e-08
emb|CBI34757.3| unnamed protein product [Vitis vinifera]               64   2e-08
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi...    63   3e-08
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...    62   6e-08
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...    60   2e-07

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 204  SSRCFVLERVDGTMEDFSYHKCIHHPLKLIAPNEAKIYESRWLNGK 67
            ++RCF L R DGT EDFSYHKC+H  L++I P  A+ Y+SRWL  +
Sbjct: 1444 NTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWLTSE 1489


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -3

Query: 204  SSRCFVLERVDGTMEDFSYHKCIHHPLKLIAPNEAKIYESRWL 76
            ++RCF L R DGT EDFSYHKC+H  L++I P  A+ Y+SRWL
Sbjct: 1302 NTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWL 1344


>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi|297332282|gb|EFH62700.1|
            NRPD1a [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = -3

Query: 210  HGSSRCFVLERVDGTMEDFSYHKCIHHPLKLIAPNEAKIYESRWL 76
            HG SRCF + R+DGT EDFSYHKC+    K+IAP +  +Y+S++L
Sbjct: 1394 HGDSRCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKVNLYKSKYL 1438


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = -3

Query: 204  SSRCFVLERVDGTMEDFSYHKCIHHPLKLIAPNEAKIYESRWLNGK 67
            ++RCFVL R DGT EDFSYHKC+   L++IAP+  K Y+S+W+  K
Sbjct: 1422 NTRCFVLIRSDGTTEDFSYHKCVLGALEIIAPHRVKGYQSKWMQEK 1467


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -3

Query: 201  SRCFVLERVDGTMEDFSYHKCIHHPLKLIAPNEAKIYESRWLNG 70
            SRCF++ R D T+EDFSY KC+ H L+LIAP +AK   SRWLNG
Sbjct: 1094 SRCFMVVRSDDTVEDFSYRKCMQHALELIAPQKAK--TSRWLNG 1135