BLASTX nr result

ID: Atractylodes22_contig00043626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00043626
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...   159   2e-37
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   154   7e-36
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   151   5e-35
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   148   4e-34
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   140   1e-31

>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Cucumis sativus]
          Length = 1015

 Score =  159 bits (402), Expect = 2e-37
 Identities = 92/150 (61%), Positives = 112/150 (74%), Gaps = 10/150 (6%)
 Frame = -2

Query: 438 PYRPGVVQETAA--DERLIYQVAVQGLNQPTQEATLPDGLLSVSLFRHQKIALDWMLKKE 265
           P+RPG  +E  A  DERLIYQ A++ LNQP QEATLPDGLLSV L RHQKIAL WML+KE
Sbjct: 209 PHRPGYGEEMVAGGDERLIYQAALEDLNQPKQEATLPDGLLSVPLLRHQKIALSWMLQKE 268

Query: 264 N-SVACSGGILADDQGLGKTISVIALIQMQKSS-SKPKSEDPCVSRAEALDLDDDNDK-- 97
           N S+ C GGILADDQGLGKT+S+I+LIQ+QKS+ SK K ED   ++AEAL+LDDD+D   
Sbjct: 269 NKSLHCLGGILADDQGLGKTVSMISLIQLQKSNQSKAKLEDGSKTKAEALNLDDDDDNGT 328

Query: 96  --GTLVVYEDK--QAGGSDELKLITKVNSS 19
             GT     DK  Q G SD++K I +V ++
Sbjct: 329 GTGTGTADSDKMQQTGESDDVKTIQEVKTT 358


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score =  154 bits (389), Expect = 7e-36
 Identities = 89/152 (58%), Positives = 109/152 (71%), Gaps = 5/152 (3%)
 Frame = -2

Query: 456 YGGRSDP-YRPGVVQETAA--DERLIYQVAVQGLNQPTQEATLPDGLLSVSLFRHQKIAL 286
           + G S+P Y      E AA  DERL+YQ A++ LNQP  EA LPDGL+SV L RHQKIAL
Sbjct: 149 FPGPSEPVYHSMAGDENAAGTDERLVYQAALEDLNQPKVEANLPDGLMSVPLLRHQKIAL 208

Query: 285 DWMLKKE-NSVACSGGILADDQGLGKTISVIALIQMQKS-SSKPKSEDPCVSRAEALDLD 112
            WML+KE  S+ C GGILADDQGLGKTIS+IAL+QMQKS  +K KSED    + EAL+LD
Sbjct: 209 AWMLQKETRSLHCLGGILADDQGLGKTISMIALVQMQKSLETKSKSEDQRNHKTEALNLD 268

Query: 111 DDNDKGTLVVYEDKQAGGSDELKLITKVNSSS 16
           DD+D GTLV+ +DKQ   S ++K   +  SS+
Sbjct: 269 DDDDNGTLVLDKDKQTRESADIKSTPEAGSST 300


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Vitis vinifera]
          Length = 1013

 Score =  151 bits (382), Expect = 5e-35
 Identities = 91/152 (59%), Positives = 110/152 (72%), Gaps = 6/152 (3%)
 Frame = -2

Query: 456 YGGRSDP-YRPGVVQETAA--DERLIYQVAVQGLNQPTQEATLPDGLLSVSLFRHQKIAL 286
           YGG S+  YRPGV +E AA  DERL+YQ A+Q LNQP  EATLPDGLL+VSL RHQKIAL
Sbjct: 234 YGGVSESAYRPGVAEEMAANTDERLVYQAALQDLNQPKVEATLPDGLLTVSLLRHQKIAL 293

Query: 285 DWMLKKE-NSVACSGGILADDQGLGKTISVIALIQMQKS-SSKPKSEDPCVSRAEALDLD 112
            WM +KE  S+ C GGILADDQGLGKT+S+IALIQMQKS  SK KSE+      EAL+LD
Sbjct: 294 AWMHQKETRSLHCLGGILADDQGLGKTVSMIALIQMQKSLQSKSKSEELHNHSTEALNLD 353

Query: 111 DDNDKGTLVVYE-DKQAGGSDELKLITKVNSS 19
           DD+D       +  KQ   + + K I++V++S
Sbjct: 354 DDDDNANAAGSDKGKQTEETSDSKPISEVSAS 385


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score =  148 bits (374), Expect = 4e-34
 Identities = 88/156 (56%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
 Frame = -2

Query: 456 YGGRSDPYRPGVVQETAA--DERLIYQVAVQGLNQPTQEATLPDGLLSVSLFRHQKIALD 283
           +G R   + P   +E  A  DERLIYQ A++ LNQP  EATLPDGLLSV L RHQKIAL 
Sbjct: 213 FGLRDPAFHPMAGEEGVAGSDERLIYQAALEDLNQPKVEATLPDGLLSVPLLRHQKIALA 272

Query: 282 WMLKKE-NSVACSGGILADDQGLGKTISVIALIQMQK-SSSKPKSEDPCVSRAEALDLDD 109
           WML+KE  S+ C GGILADDQGLGKT+S+IALIQMQK    K KSED    ++EAL+LDD
Sbjct: 273 WMLQKETRSLHCLGGILADDQGLGKTVSMIALIQMQKFLQLKSKSEDQANKKSEALNLDD 332

Query: 108 DNDKGTLVVYEDKQAGGSDELKLITKVNSSSSTREF 1
           D++ G   + E KQ G  D+   + +  +S+STR F
Sbjct: 333 DDESGRPGLNEVKQVGEYDDTTSVPE--ASNSTRVF 366


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 975

 Score =  140 bits (353), Expect = 1e-31
 Identities = 80/144 (55%), Positives = 103/144 (71%), Gaps = 4/144 (2%)
 Frame = -2

Query: 435 YRPGVVQETAA--DERLIYQVAVQGLNQPTQEATLPDGLLSVSLFRHQKIALDWMLKKE- 265
           YR G   E AA  DERLIY+ A+Q ++QP  E  LP G+LSVSL RHQKIAL WML+KE 
Sbjct: 200 YRAGAGDERAAESDERLIYEAALQDISQPKTEYDLPAGVLSVSLLRHQKIALAWMLQKET 259

Query: 264 NSVACSGGILADDQGLGKTISVIALIQMQKS-SSKPKSEDPCVSRAEALDLDDDNDKGTL 88
            S+ C GGILADDQGLGKTIS+I+LI  Q+S  SK K +D C  + EAL+LDDD+D G++
Sbjct: 260 KSLHCLGGILADDQGLGKTISMISLILAQRSLQSKSKIDDTCSHKTEALNLDDDDDNGSV 319

Query: 87  VVYEDKQAGGSDELKLITKVNSSS 16
            V + K +  SD++K   + +SS+
Sbjct: 320 DVEKHKNSEESDDIKPSREPSSST 343


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